Sb04g005180 (Sorghum bicolor)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Sb04g005180 T323000_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL8
M02714_2.00
Arabidopsis thaliana
DWWDDDGTACRNWNHW

WDNWNYGTACHHHWWH
SELEX
Mathelier et al.(2014)
MA0578.1
0.908 0.787
fgenesh1_pg.scaffold_252000020
M02481_2.00
Physcomitrella patens
NNNKRCVNN

NNBGYMNNN
PBM
Weirauch et al.(2014)
pTH8491
0.896 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb04g005180.1 SBP 205 279

Links

Other SBP family TFs
Other Sorghum bicolor TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.986
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.986
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.985
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.984
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.984
OB06G31100 Oryza brachyantha OB06G31100 I 0.984
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.984
MLOC_326 Hordeum vulgare MLOC_326 I 0.984
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.984
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.984
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.984
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.984
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.984
Si006559m.g Setaria italica Si006559m.g I 0.984
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.984
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.984
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.984
SPL10 Oryza sativa OS06G0659100 I 0.984
SPL10 Oryza indica BGIOSGA023408 I 0.984
OB02G15090 Oryza brachyantha OB02G15090 I 0.983
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.983
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.983
OPUNC02G05050 Oryza punctata OPUNC02G05050 I 0.982
Si017338m.g Setaria italica Si017338m.g I 0.979
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.979
BRADI1G31390 Brachypodium distachyon BRADI1G31390 I 0.979
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.979
OBART06G23500 Oryza barthii OBART06G23500 I 0.977
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.973
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.973
SPL5 Oryza sativa OS02G0177300 I 0.973
Traes_7DL_1957A97EC Triticum aestivum Traes_7DL_1957A97EC N 0.973
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.973
TRIUR3_10193 Triticum urartu TRIUR3_10193 I 0.971
MLOC_6525 Hordeum vulgare MLOC_6525 I 0.966
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.962
TRIUR3_34424 Triticum urartu TRIUR3_34424 N 0.960
F775_00761 Aegilops tauschii F775_00761 I 0.960
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.948
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.944
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.936
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.936
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.936
Cla020006 Citrullus lanatus Cla020006 I 0.933
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.933
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.932
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.930
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.930
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.926
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.925
Si022315m.g Setaria italica Si022315m.g I 0.923
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.923
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.923
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.923
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.923
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.923
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.923
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.923
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.923
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.923
SPL8 Oryza sativa OS04G0656500 I 0.923
OB04G34990 Oryza brachyantha OB04G34990 I 0.923
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.923
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.923
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.923
OBART04G27990 Oryza barthii OBART04G27990 I 0.923
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.923
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.923
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.923
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.923
F775_20508 Aegilops tauschii F775_20508 N 0.922
Traes_7DL_2D8356B05 Triticum aestivum Traes_7DL_2D8356B05 N 0.922
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.921
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.919
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.918
29983.m003158 Ricinus communis 29983.m003158 I 0.916
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.914
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.913
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.911
Bra033221 Brassica rapa Bra033221 I 0.908
SPL8 Arabidopsis thaliana AT1G02065 D 0.908
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.908
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.908
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.908
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.908
Bo5g001290 Brassica oleracea Bo5g001290 I 0.908
Bo8g118210 Brassica oleracea Bo8g118210 I 0.908
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.908
Bra032662 Brassica rapa Bra032662 I 0.908
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.907
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.905
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.903
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.903
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.903
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.903
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.903
PK25779.1 Cannabis sativa PK25779.1 I 0.903
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.903
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.903
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.903
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.903
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.903
Ca_18942 Cicer arietinum Ca_18942 I 0.903
TCM_005622 Theobroma cacao TCM_005622 I 0.903
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.903
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.903
30174.m008803 Ricinus communis 30174.m008803 I 0.903
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.902
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.902
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.902
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.902
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.901
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.901
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.901
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.900
mgf016085m Mimulus guttatus mgf016085m I 0.900
MDP0000803116 Malus domestica MDP0000803116 I 0.900
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.899
Cla006776 Citrullus lanatus Cla006776 I 0.899
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.899
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.899
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.896
Solyc07g053810.2 Solanum lycopersicum Solyc07g053810.2 I 0.894
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.890
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.890