SPL9 (Arabidopsis lyrata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 scaffold_403069.1 T323012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL9
M01308_2.00
Arabidopsis thaliana
NGTACKDNN

NNHMGTACN
PBM
Lambert et al.(2019)
pTH11560
0.976 0.987
SPL9
M07257_2.00
Arabidopsis thaliana
NNYGTACKKHH

DDMMGTACRNN
Dap-seq
OMalley et al.(2016)
SPL9_col_a
0.976 0.987
SPL9
M07258_2.00
Arabidopsis thaliana
NDNTGTACGGA

TCCGTACANHN
Dap-seq
OMalley et al.(2016)
SPL9_colamp_a
0.976 0.987
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_403069.1 SBP 73 147

Links

Other SBP family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action