SELMODRAFT_28630 (Selaginella moellendorffii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 SELMODRAFT_28630 T323025_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fgenesh1_pg.scaffold_252000020
M02481_2.00
Physcomitrella patens
NNNKRCVNN

NNBGYMNNN
PBM
Weirauch et al.(2014)
pTH8491
0.969 0.824
fgenesh1_pg.scaffold_194000034
M02480_2.00
Physcomitrella patens
NNNGTACNNN

NNNGTACNNN
PBM
Weirauch et al.(2014)
pTH8580
0.968 0.838
SPL8
M02714_2.00
Arabidopsis thaliana
DWWDDDGTACRNWNHW

WDNWNYGTACHHHWWH
SELEX
Mathelier et al.(2014)
MA0578.1
0.928 0.797
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ38765 SBP 7 80

Links

Other SBP family TFs
Other Selaginella moellendorffii TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.969
SPL8 Arabidopsis thaliana AT1G02065 D 0.928
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.968
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.921
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.927
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.929
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.921
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.889
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.938
cassava13944.valid.m1 Manihot esculenta cassava13944.valid.m1 I 0.896
30174.m009082 Ricinus communis 30174.m009082 I 0.921
Cucsa.120620 Cucumis sativus Cucsa.120620 I 0.903
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.934
mgf016085m Mimulus guttatus mgf016085m I 0.936
mgf002455m Mimulus guttatus mgf002455m I 0.886
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.953
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.954
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.921
fgenesh1_pg.scaffold_23000047 Physcomitrella patens fgenesh1_pg.scaffold_23000047 I 0.919
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.937
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.897
30174.m008803 Ricinus communis 30174.m008803 I 0.938
30138.m003942 Ricinus communis 30138.m003942 I 0.922
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.919
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.942
TCM_014330 Theobroma cacao TCM_014330 I 0.922
TCM_011483 Theobroma cacao TCM_011483 I 0.887
TCM_005622 Theobroma cacao TCM_005622 I 0.938
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.930
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.938
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I 0.891
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.927
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.921
Ca_18942 Cicer arietinum Ca_18942 I 0.938
Pm025028 Prunus mume Pm025028 I 0.887
Pm017777 Prunus mume Pm017777 I 0.912
Pm014154 Prunus mume Pm014154 I 0.890
Cla019331 Citrullus lanatus Cla019331 I 0.921
Cla018827 Citrullus lanatus Cla018827 I 0.925
Cla006776 Citrullus lanatus Cla006776 I 0.936
Cla001541 Citrullus lanatus Cla001541 I 0.897
Ca_19449 Cicer arietinum Ca_19449 I 0.921
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.907
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.908
PK25779.1 Cannabis sativa PK25779.1 I 0.938
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.910
MDP0000803116 Malus domestica MDP0000803116 I 0.943
MDP0000778465 Malus domestica MDP0000778465 I 0.920
MDP0000146640 Malus domestica MDP0000146640 I 0.920
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.933
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.892
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.935
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.920
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.941
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.920
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.942
PK17790.1 Cannabis sativa PK17790.1 I 0.914
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.928
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.938
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.891
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.921
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.927
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.942
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I 0.887
Lus10015421.g Linum usitatissimum Lus10015421.g I 0.885
Lus10013999.g Linum usitatissimum Lus10013999.g I 0.885
Eucgr.K02545 Eucalyptus grandis Eucgr.K02545 I 0.896
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.938
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.912
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.887
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.941
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.910
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.931
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.928
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.938
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.921
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.938
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.920
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.894
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.938
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.893
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I 0.891
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.887
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.938
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.887
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.928
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.923
OBART04G20940 Oryza barthii OBART04G20940 I 0.903
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.911
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.914
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.888
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.915
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.905
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.905
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.895
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.918
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.936
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.886
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.886
OB04G34990 Oryza brachyantha OB04G34990 I 0.942
OB04G27960 Oryza brachyantha OB04G27960 I 0.904
OB02G15090 Oryza brachyantha OB02G15090 I 0.886
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.936
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.921
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.921
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.942
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.942
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.940
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.942
Bo8g118210 Brassica oleracea Bo8g118210 I 0.928
Bo6g031220 Brassica oleracea Bo6g031220 I 0.897
Bo5g001290 Brassica oleracea Bo5g001290 I 0.928
Bo3g042890 Brassica oleracea Bo3g042890 I 0.893
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.942
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.903
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.891
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.927
Bra032662 Brassica rapa Bra032662 I 0.928
Bra033221 Brassica rapa Bra033221 I 0.928
Bra039656 Brassica rapa Bra039656 I 0.897
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.921
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.938
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.921
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.938
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.926
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.921
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.928
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.942
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.898
OBART04G27990 Oryza barthii OBART04G27990 I 0.942
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.938
PRUPE_ppa008560mg Prunus persica PRUPE_ppa008560mg I 0.912
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.887
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.918
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.938
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.921
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.915
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.938
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.938
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.890
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.942
SELMODRAFT_17706 Selaginella moellendorffii SELMODRAFT_17706 I 0.983
Si032170m.g Setaria italica Si032170m.g I 0.890
Si022315m.g Setaria italica Si022315m.g I 0.942
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.945
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.940
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.974
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.974
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.940
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.945
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.938
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.923
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.903
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.942
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.903
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.942
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.903
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.891
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.942
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.942
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.942
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.891
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.903
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.930
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.907
SPL8 Oryza sativa OS04G0656500 I 0.942
SPL7 Oryza sativa OS04G0551500 I 0.903
SPL5 Oryza sativa OS02G0177300 I 0.891
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.942
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.903
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.942
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.903