Solyc10g078700.1 (Solanum lycopersicum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Solyc10g078700.1 T323072_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL15
M07263_2.00
Arabidopsis thaliana
DNWNTGTACGGAHN

NDTCCGTACANWNH
Dap-seq
OMalley et al.(2016)
SPL15_col_a
0.927 0.813
SPL15
M07264_2.00
Arabidopsis thaliana
DNTGTACGGAHNNNN

NNNNDTCCGTACANH
Dap-seq
OMalley et al.(2016)
SPL15_colamp_a
0.927 0.813
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.887 0.787
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g078700.1.1 SBP 76 150

Links

Other SBP family TFs
Other Solanum lycopersicum TFs

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86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action