CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIUR3_10193
(
Triticum urartu
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
TRIUR3_10193
T323130_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL3
M07255_2.00
Arabidopsis thaliana
NGTACGGA
TCCGTACN
Dap-seq
OMalley et al.(2016)
SPL3_col_a
0.915
0.733
SPL3
M07256_2.00
Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN
Dap-seq
OMalley et al.(2016)
SPL3_colamp_a
0.915
0.733
SPL3
M02715_2.00
Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH
SELEX
Mathelier et al.(2014)
MA0577.1
0.915
0.733
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH
DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.892
0.800
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRIUR3_10193-P1
SBP
171
245
CQVEDCKADLSGAKHYHRRHKVCEYHAKASLVAAAGKQQRFCQQCSRFHVLTEFDEAKRSCRRRLAEHNRRRRKP
Links
Other
SBP
family TFs
Other
Triticum urartu
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_6525
Hordeum vulgare
MLOC_6525
I
0.983
Traes_7DL_ED348696E
Triticum aestivum
Traes_7DL_ED348696E
I
0.974
ORGLA06G0196600
Oryza glaberrima
ORGLA06G0196600
I
0.974
OGLUM06G24700
Oryza glumaepatula
OGLUM06G24700
I
0.974
Sb10g026200
Sorghum bicolor
Sb10g026200
I
0.974
ONIVA01G24470
Oryza nivara
ONIVA01G24470
I
0.974
SPL10
Oryza sativa
OS06G0659100
I
0.974
OMERI06G23430
Oryza meridionalis
OMERI06G23430
I
0.974
ORUFI06G25170
Oryza rufipogon
ORUFI06G25170
I
0.974
OPUNC06G21190
Oryza punctata
OPUNC06G21190
I
0.974
Pavir.Db00525
Panicum virgatum
Pavir.Db00525
I
0.974
SPL10
Oryza indica
BGIOSGA023408
I
0.974
OB06G31100
Oryza brachyantha
OB06G31100
I
0.974
MLOC_326
Hordeum vulgare
MLOC_326
I
0.974
Si006559m.g
Setaria italica
Si006559m.g
I
0.974
LPERR06G19480
Leersia perrieri
LPERR06G19480
I
0.974
Pavir.Da00293
Panicum virgatum
Pavir.Da00293
I
0.974
GRMZM2G101499
Zea mays
GRMZM2G101499
I
0.972
GRMZM2G111136
Zea mays
GRMZM2G111136
I
0.971
Sb04g005180
Sorghum bicolor
Sb04g005180
I
0.971
BRADI3G05720
Brachypodium distachyon
BRADI3G05720
I
0.971
Traes_7DL_1957A97EC
Triticum aestivum
Traes_7DL_1957A97EC
N
0.969
MLOC_51510
Hordeum vulgare
MLOC_51510
I
0.969
LPERR02G05080
Leersia perrieri
LPERR02G05080
I
0.965
BRADI1G31390
Brachypodium distachyon
BRADI1G31390
I
0.965
OB02G15090
Oryza brachyantha
OB02G15090
I
0.965
OPUNC02G05050
Oryza punctata
OPUNC02G05050
I
0.963
OBART06G23500
Oryza barthii
OBART06G23500
I
0.961
Traes_7DL_2D8356B05
Triticum aestivum
Traes_7DL_2D8356B05
N
0.960
F775_20508
Aegilops tauschii
F775_20508
N
0.960
Si017338m.g
Setaria italica
Si017338m.g
I
0.958
GRMZM2G168229
Zea mays
GRMZM2G168229
I
0.958
Pavir.Ab00520
Panicum virgatum
Pavir.Ab00520
I
0.957
TRIUR3_34424
Triticum urartu
TRIUR3_34424
N
0.954
OMERI02G06720
Oryza meridionalis
OMERI02G06720
I
0.946
SPL5
Oryza sativa
OS02G0177300
I
0.946
ORGLA02G0053800
Oryza glaberrima
ORGLA02G0053800
I
0.946
BGIOSGA007655
Oryza indica
BGIOSGA007655
I
0.946
AMTR_s00019p00235390
Amborella trichopoda
AMTR_s00019p00235390
I
0.940
29983.m003158
Ricinus communis
29983.m003158
I
0.937
GSMUA_Achr7G08750_001
Musa acuminata
GSMUA_Achr7G08750_001
I
0.937
PGSC0003DMG400032817
Solanum tuberosum
PGSC0003DMG400032817
I
0.934
MDP0000156994
Malus domestica
MDP0000156994
I
0.933
MDP0000861601
Malus domestica
MDP0000861601
I
0.933
MTR_4g088555
Medicago truncatula
MTR_4g088555
I
0.930
TCM_029832
Theobroma cacao
TCM_029832
I
0.929
GLYMA13G31090
Glycine max
GLYMA13G31090
I
0.925
Gorai.011G029400
Gossypium raimondii
Gorai.011G029400
I
0.924
Bo4g042390
Brassica oleracea
Bo4g042390
I
0.923
Bra005470
Brassica rapa
Bra005470
I
0.923
GLYMA15G08270
Glycine max
GLYMA15G08270
I
0.922
Solyc07g053810.2
Solanum lycopersicum
Solyc07g053810.2
I
0.921
F775_00761
Aegilops tauschii
F775_00761
I
0.921
Thhalv10017406m.g
Eutrema salsugineum
Thhalv10017406m.g
I
0.918
Carubv10024311m.g
Capsella rubella
Carubv10024311m.g
I
0.917
SPL3
Arabidopsis lyrata
fgenesh2_kg.4__1394__AT2G33810.1
I
0.917
Cagra.1195s0023
Capsella grandiflora
Cagra.1195s0023
I
0.917
GSMUA_Achr4G20590_001
Musa acuminata
GSMUA_Achr4G20590_001
I
0.916
SPL3
Arabidopsis thaliana
AT2G33810
D
0.915
Bo3g027460
Brassica oleracea
Bo3g027460
I
0.915
GLYMA12G27330
Glycine max
GLYMA12G27330
I
0.914
MTR_8g463140
Medicago truncatula
MTR_8g463140
I
0.914
chr3.CM0282.980.nc
Lotus japonicus
chr3.CM0282.980.nc
I
0.914
Ca_16243
Cicer arietinum
Ca_16243
I
0.914
GLYMA06G36140
Glycine max
GLYMA06G36140
I
0.914
POPTR_0007s01030
Populus trichocarpa
POPTR_0007s01030
I
0.913
gene29726-v1.0-hybrid
Fragaria vesca
gene29726-v1.0-hybrid
I
0.913
Cucsa.196000
Cucumis sativus
Cucsa.196000
I
0.912
chr3.CM0160.520.nc
Lotus japonicus
chr3.CM0160.520.nc
I
0.912
MTR_2g078770
Medicago truncatula
MTR_2g078770
I
0.911
Pm011381
Prunus mume
Pm011381
I
0.910
MDP0000158607
Malus domestica
MDP0000158607
I
0.910
PRUPE_ppa022739mg
Prunus persica
PRUPE_ppa022739mg
I
0.910
GSMUA_Achr3G00810_001
Musa acuminata
GSMUA_Achr3G00810_001
I
0.909
mgf016414m
Mimulus guttatus
mgf016414m
I
0.907
Cla023735
Citrullus lanatus
Cla023735
I
0.906
VIT_12s0028g03350
Vitis vinifera
VIT_12s0028g03350
I
0.906
Aquca_033_00055
Aquilegia coerulea
Aquca_033_00055
I
0.904
GSMUA_Achr10G06210_001
Musa acuminata
GSMUA_Achr10G06210_001
I
0.897
Eucgr.E03260
Eucalyptus grandis
Eucgr.E03260
I
0.897
SELMODRAFT_17777
Selaginella moellendorffii
SELMODRAFT_17777
I
0.897
Aquca_024_00116
Aquilegia coerulea
Aquca_024_00116
I
0.896
28211.m000132
Ricinus communis
28211.m000132
I
0.896
Ca_22526
Cicer arietinum
Ca_22526
I
0.896
mgf017351m
Mimulus guttatus
mgf017351m
I
0.895
Bostr.23794s0714
Boechera stricta
Bostr.23794s0714
I
0.894
Bra022954
Brassica rapa
Bra022954
I
0.894
cassava13944.valid.m1
Manihot esculenta
cassava13944.valid.m1
I
0.893
Ca_00320
Cicer arietinum
Ca_00320
I
0.893
SELMODRAFT_7674
Selaginella moellendorffii
SELMODRAFT_7674
I
0.893
GLYMA13G35000
Glycine max
GLYMA13G35000
I
0.892
GLYMA12G35460
Glycine max
GLYMA12G35460
I
0.892
evm.TU.supercontig_80.88
Carica papaya
evm.TU.supercontig_80.88
I
0.892
Ciclev10016841m.g
Citrus clementina
Ciclev10016841m.g
I
0.892
PRUPE_ppa008560mg
Prunus persica
PRUPE_ppa008560mg
I
0.892
fgenesh1_pg.scaffold_50000083
Physcomitrella patens
fgenesh1_pg.scaffold_50000083
I
0.892
cassava37839.valid.m1
Manihot esculenta
cassava37839.valid.m1
I
0.892
Cla020006
Citrullus lanatus
Cla020006
I
0.892
estExt_fgenesh1_pg.C_1940033
Physcomitrella patens
estExt_fgenesh1_pg.C_1940033
D
0.892
Pm017777
Prunus mume
Pm017777
I
0.892
SELMODRAFT_437670
Selaginella moellendorffii
SELMODRAFT_437670
I
0.890
orange1.1g029650m.g
Citrus sinensis
orange1.1g029650m.g
I
0.890
chr6.CM0114.270.nc
Lotus japonicus
chr6.CM0114.270.nc
I
0.890
Solyc10g009080.2
Solanum lycopersicum
Solyc10g009080.2
I
0.890
SELMODRAFT_445524
Selaginella moellendorffii
SELMODRAFT_445524
I
0.890
GLYMA01G15258
Glycine max
GLYMA01G15258
I
0.890
orange1.1g032310m.g
Citrus sinensis
orange1.1g032310m.g
I
0.888
SELMODRAFT_28629
Selaginella moellendorffii
SELMODRAFT_28629
I
0.888
SELMODRAFT_59884
Selaginella moellendorffii
SELMODRAFT_59884
I
0.888
MDP0000180408
Malus domestica
MDP0000180408
I
0.887
TCM_031595
Theobroma cacao
TCM_031595
I
0.887
Thhalv10021617m.g
Eutrema salsugineum
Thhalv10021617m.g
I
0.887
PRUPE_ppa000792mg
Prunus persica
PRUPE_ppa000792mg
I
0.887
Gorai.013G169800
Gossypium raimondii
Gorai.013G169800
I
0.887
Bra027265
Brassica rapa
Bra027265
I
0.886
Bo5g127310
Brassica oleracea
Bo5g127310
I
0.886
SapurV1A.0118s0110
Salix purpurea
SapurV1A.0118s0110
I
0.886
SapurV1A.3749s0010
Salix purpurea
SapurV1A.3749s0010
I
0.886
Bostr.28625s0189
Boechera stricta
Bostr.28625s0189
I
0.886
Traes_7AL_03E14BABE
Triticum aestivum
Traes_7AL_03E14BABE
N
0.753