Ca_11356 (Cicer arietinum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Ca_11356 T323171_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL10
M01084_2.00
Arabidopsis thaliana
NNGTACGRHN

NDYCGTACNN
PBM
Sullivan et al.(2014)
pTH9749
0.889 0.827
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_11356 SBP 171 245

Links

Other SBP family TFs
Other Cicer arietinum TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_31908 Aegilops tauschii F775_31908 N 0.933
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.946
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.955
SPL10 Arabidopsis thaliana AT1G27370 D 0.889
SPL2 Arabidopsis thaliana AT5G43270 N 0.955
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.946
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.939
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.960
Bo9g058970 Brassica oleracea Bo9g058970 N 0.955
Bo7g065290 Brassica oleracea Bo7g065290 N 0.953
Bra027478 Brassica rapa Bra027478 N 0.955
Bra033671 Brassica rapa Bra033671 N 0.955
PK16953.1 Cannabis sativa PK16953.1 N 0.967
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.956
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.956
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.956
Ca_08506 Cicer arietinum Ca_08506 I 0.942
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.969
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.969
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.940
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.955
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.958
GLYMA18G00903 Glycine max GLYMA18G00903 N 0.926
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.924
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.966
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.930
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.954
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.925
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.930
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.932
Lus10011356.g Linum usitatissimum Lus10011356.g I 0.924
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.941
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.936
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.974
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.962
MDP0000155354 Malus domestica MDP0000155354 N 0.967
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.966
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.964
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.963
mgf010397m Mimulus guttatus mgf010397m N 0.946
mgf019346m Mimulus guttatus mgf019346m I 0.950
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.957
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.922
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.958
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.957
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.958
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.955
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.944
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.956
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.942
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.951
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.954
OBART02G03260 Oryza barthii OBART02G03260 N 0.927
OBART06G26610 Oryza barthii OBART06G26610 N 0.922
OB02G12930 Oryza brachyantha OB02G12930 N 0.932
OB06G34330 Oryza brachyantha OB06G34330 N 0.912
OB02G14840 Oryza brachyantha OB02G14840 N 0.924
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.922
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.932
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.927
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.922
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.932
SPL12 Oryza indica BGIOSGA020577 N 0.922
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.932
SPL3 Oryza indica BGIOSGA007499 N 0.927
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.922
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.927
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.927
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.922
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.932
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.927
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.932
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.922
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.930
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.932
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.921
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.922
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.932
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.927
SPL12 Oryza sativa OS06G0703500 N 0.922
SPL4 Oryza sativa OS02G0174100 N 0.932
OS02G0139400 Oryza sativa OS02G0139400 N 0.927
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.943
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.943
Pavir.Ab00358 Panicum virgatum Pavir.Ab00358 N 0.907
Pavir.Aa03225 Panicum virgatum Pavir.Aa03225 N 0.907
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.920
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.958
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.958
Pm007020 Prunus mume Pm007020 N 0.969
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.967
29929.m004641 Ricinus communis 29929.m004641 I 0.956
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.958
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.958
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.920
Si017520m.g Setaria italica Si017520m.g N 0.910
Si017749m.g Setaria italica Si017749m.g N 0.941
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.928
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.951
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.969
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.913
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.955
TCM_008772 Theobroma cacao TCM_008772 N 0.970
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.933
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.939
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.928
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.928
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.939
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.928
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.960
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.922
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.930
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.955
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.955
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.932
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.956