Pm010075 (Prunus mume)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pm010075 T323205_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN

NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.947 0.760
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN

NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.933 0.720
SPL14
M02470_2.00
Arabidopsis thaliana
NNNRTACNN

NNGTAYNNN
PBM
Weirauch et al.(2014)
pTH8191
0.928 0.720
POPTR_0002s00440
M02477_2.00
Populus trichocarpa
NGTACGG

CCGTACN
PBM
Weirauch et al.(2014)
pTH9280
0.928 0.720
SPL14
M07253_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL14_col_a
0.928 0.720
SPL14
M11270_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPL14_01
0.928 0.720
SPL3
M07255_2.00
Arabidopsis thaliana
NGTACGGA

TCCGTACN
Dap-seq
OMalley et al.(2016)
SPL3_col_a
0.924 0.733
SPL3
M07256_2.00
Arabidopsis thaliana
NDNTGTACGGAHN

NDTCCGTACANHN
Dap-seq
OMalley et al.(2016)
SPL3_colamp_a
0.924 0.733
SPL3
M02715_2.00
Arabidopsis thaliana
DDDDDNGTACGKHHHH

DDDDMCGTACNHHHHH
SELEX
Mathelier et al.(2014)
MA0577.1
0.924 0.733
SPL12
M02475_2.00
Arabidopsis thaliana
NGTACGDN

NHCGTACN
PBM
Weirauch et al.(2014)
pTH7500
0.924 0.707
PRUPE_ppa000682mg
M02478_2.00
Prunus persica
NNNNGTACGD

HCGTACNNNN
PBM
Weirauch et al.(2014)
pTH9281
0.921 0.693
AT1G76580
M02473_2.00
Arabidopsis thaliana
NNNRTAYNNN

NNNRTAYNNN
PBM
Weirauch et al.(2014)
pTH8668
0.918 0.707
SPL5
M02474_2.00
Arabidopsis thaliana
NNGTACGDN

NHCGTACNN
PBM
Weirauch et al.(2014)
pTH7385
0.916 0.760
SPL5
M07261_2.00
Arabidopsis thaliana
NDNYGTACGGAH

DTCCGTACRNHN
Dap-seq
OMalley et al.(2016)
SPL5_col_a
0.916 0.760
SPL5
M07262_2.00
Arabidopsis thaliana
NBGTACGGWH

DWCCGTACVN
Dap-seq
OMalley et al.(2016)
SPL5_colamp_a
0.916 0.760
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.912 0.720
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.910 0.707
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.910 0.707
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.910 0.707
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.897 0.680
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm010075 SBP 80 154

Links

Other SBP family TFs
Other Prunus mume TFs

421 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZHX1 Homo sapiens ENSG00000165156 D 0.000
ZHX1 Sus scrofa ENSSSCG00000005984 N 0.000
ENSSHAG00000013245 Sarcophilus harrisii ENSSHAG00000013245 N 0.000
ZHX1 Sorex araneus ENSSARG00000008993 N 0.000
Zhx1 Rattus norvegicus ENSRNOG00000006412 N 0.000
ZHX1 Pan troglodytes ENSPTRG00000020550 N 0.000
ENSPSIG00000006703 Pelodiscus sinensis ENSPSIG00000006703 N 0.000
ENSPPYG00000018856 Pongo abelii ENSPPYG00000018856 N 0.000
ENSPFOG00000018986 Poecilia formosa ENSPFOG00000018986 N 0.000
ENSPFOG00000003808 Poecilia formosa ENSPFOG00000003808 N 0.000
ZHX1 Procavia capensis ENSPCAG00000007447 N 0.000
ENSPANG00000017349 Papio anubis ENSPANG00000017349 N 0.000
ENSONIG00000007283 Oreochromis niloticus ENSONIG00000007283 N 0.000
XP_002941441 Xenopus tropicalis XP_002941441 N 0.000
ENSSTOG00000016571 Ictidomys tridecemlineatus ENSSTOG00000016571 N 0.000
ZHX1 Tupaia belangeri ENSTBEG00000005916 N 0.000
Pvit_18219 Pogona vitticeps Pvit_18219 N 0.000
Myotis_brandtii_ZHX1_10012476 Myotis brandtii Myotis_brandtii_ZHX1_10012476 N 0.000
ENSP00000297857 Macaca fascicularis ENSP00000297857 N 0.000
ENSBTAP00000020381-D1 Bos grunniens ENSBTAP00000020381-D1 N 0.000
Cmyd_10002293 Chelonia mydas Cmyd_10002293 N 0.000
Alligator_sinensis_CCG017544.1 Alligator sinensis Alligator_sinensis_CCG017544.1 N 0.000
ENSXMAG00000008964 Xiphophorus maculatus ENSXMAG00000008964 N 0.000
ENSXMAG00000001501 Xiphophorus maculatus ENSXMAG00000001501 N 0.000
ZHX1 Tursiops truncatus ENSTTRG00000005426 N 0.000
ZHX1 Takifugu rubripes ENSTRUG00000017544 N 0.000
ZHX1 Tetraodon nigroviridis ENSTNIG00000019079 N 0.000
ZHX1 Otolemur garnettii ENSOGAG00000027737 N 0.000
ZHX1 Oryctolagus cuniculus ENSOCUG00000009776 N 0.000
ENSOARG00000010486 Ovis aries ENSOARG00000010486 N 0.000
ENSFALG00000014380 Ficedula albicollis ENSFALG00000014380 N 0.000
ZHX1 Erinaceus europaeus ENSEEUG00000000664 N 0.000
ZHX1 Equus caballus ENSECAG00000023451 N 0.000
ZHX1 Dasypus novemcinctus ENSDNOG00000043739 N 0.000
ENSCSAG00000010631 Chlorocebus sabaeus ENSCSAG00000010631 N 0.000
ZHX1 Callithrix jacchus ENSCJAG00000000934 N 0.000
ZHX1 Canis familiaris ENSCAFG00000001001 N 0.000
ZHX1 Bos taurus ENSBTAG00000015334 N 0.000
ENSAPLG00000010954 Anas platyrhynchos ENSAPLG00000010954 N 0.000
ENSAMXG00000016320 Astyanax mexicanus ENSAMXG00000016320 N 0.000
ENSAMEG00000018759 Ailuropoda melanoleuca ENSAMEG00000018759 N 0.000
ZHX1 Felis catus ENSFCAG00000013745 N 0.000
ENSGACG00000005679 Gasterosteus aculeatus ENSGACG00000005679 N 0.000
ENSGALG00000016378 Gallus gallus ENSGALG00000016378 N 0.000
ENSNLEG00000005308 Nomascus leucogenys ENSNLEG00000005308 N 0.000
Zhx1 Mus musculus ENSMUSG00000022361 N 0.000
ENSMPUG00000018555 Mustela putorius furo ENSMPUG00000018555 N 0.000
ZHX1 Monodelphis domestica ENSMODG00000002035 N 0.000
ZHX1 Macaca mulatta ENSMMUG00000006050 N 0.000
ZHX1 Myotis lucifugus ENSMLUG00000013728 N 0.000
ZHX1 Meleagris gallopavo ENSMGAG00000012584 N 0.000
ENSMEUG00000012682 Macropus eugenii ENSMEUG00000012682 N 0.000
ZHX1 Loxodonta africana ENSLAFG00000005884 N 0.000
ENSLACG00000010412 Latimeria chalumnae ENSLACG00000010412 N 0.000
ZHX1 Gorilla gorilla ENSGGOG00000028565 N 0.000
ZHX1 Anolis carolinensis ENSACAG00000009608 N 0.000