30147.m014478 (Ricinus communis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 30147.m014478 T323224_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH

DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.954 0.840
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30147.m014478 SBP 95 169

Links

Other SBP family TFs
Other Ricinus communis TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK02140.1 Cannabis sativa PK02140.1 I 0.972
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.971
Ca_05711 Cicer arietinum Ca_05711 I 0.971
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.970
Pm024528 Prunus mume Pm024528 I 0.970
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.970
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.970
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.970
Cla002666 Citrullus lanatus Cla002666 I 0.970
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.970
Pm016138 Prunus mume Pm016138 I 0.969
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.969
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.968
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.968
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.968
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.968
Ca_01426 Cicer arietinum Ca_01426 I 0.968
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.967
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.967
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.966
PRUPE_ppa007202mg Prunus persica PRUPE_ppa007202mg I 0.966
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.965
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.964
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.963
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.961
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.961
TCM_014668 Theobroma cacao TCM_014668 I 0.961
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.961
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.961
Cla019579 Citrullus lanatus Cla019579 I 0.961
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.961
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.959
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.957
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.957
TCM_008671 Theobroma cacao TCM_008671 I 0.957
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.957
MDP0000176265 Malus domestica MDP0000176265 I 0.956
29929.m004627 Ricinus communis 29929.m004627 I 0.955
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.955
Bo9g097630 Brassica oleracea Bo9g097630 I 0.955
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.955
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.954
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.954
Bo3g024180 Brassica oleracea Bo3g024180 I 0.954
SPL13A Arabidopsis thaliana AT5G50570 I 0.954
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.954
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.954
SPL13A Arabidopsis thaliana AT5G50670 D 0.954
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.953
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.953
Cla001541 Citrullus lanatus Cla001541 I 0.953
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.953
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.952
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.950
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.948
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.947
MDP0000142582 Malus domestica MDP0000142582 N 0.947
PK19500.1 Cannabis sativa PK19500.1 I 0.946
Bra022766 Brassica rapa Bra022766 I 0.946
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.945
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.945
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.945
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.945
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.945
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.945
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.945
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.945
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.945
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.945
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.943
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.943
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.942
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.941
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.940
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.939
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.939
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.938
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.938
Cla004156 Citrullus lanatus Cla004156 I 0.938
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.937
MDP0000263766 Malus domestica MDP0000263766 I 0.936
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.936
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.935
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.934
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.933
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.933
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.932
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.932
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.930
PK14243.1 Cannabis sativa PK14243.1 N 0.930
OS01G0922600 Oryza sativa OS01G0922600 I 0.929
Bo3g042890 Brassica oleracea Bo3g042890 I 0.929
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.928
OBART01G42150 Oryza barthii OBART01G42150 I 0.928
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I 0.927
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.924
mgf010913m Mimulus guttatus mgf010913m I 0.923
mgf003797m Mimulus guttatus mgf003797m I 0.923
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.921
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.920
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.920
Si001804m.g Setaria italica Si001804m.g I 0.920
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.917
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.917
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.916
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.916
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.916
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.916
MDP0000170630 Malus domestica MDP0000170630 N 0.913
Pm007035 Prunus mume Pm007035 I 0.913
PK17790.1 Cannabis sativa PK17790.1 I 0.911
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.909
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.908
SPL16 Oryza sativa OS08G0531600 I 0.908
Si026656m.g Setaria italica Si026656m.g I 0.908
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.908
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.908
Bo6g031220 Brassica oleracea Bo6g031220 I 0.905
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.905
Bra039656 Brassica rapa Bra039656 I 0.905
SELMODRAFT_28595 Selaginella moellendorffii SELMODRAFT_28595 I 0.904
SELMODRAFT_28598 Selaginella moellendorffii SELMODRAFT_28598 I 0.904
SELMODRAFT_28635 Selaginella moellendorffii SELMODRAFT_28635 N 0.903
SELMODRAFT_28634 Selaginella moellendorffii SELMODRAFT_28634 N 0.903
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.902
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.900
Aquca_007_00971 Aquilegia coerulea Aquca_007_00971 I 0.899
SPL19 Oryza sativa OS11G0496600 I 0.899
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.899
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.899
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.899
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.898
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.898
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.898
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.897
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.897
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.894
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.894
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.893
SPL18 Oryza sativa OS09G0507100 I 0.893
OBART09G15750 Oryza barthii OBART09G15750 I 0.893
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.893
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.893
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.891
MDP0000146640 Malus domestica MDP0000146640 I 0.890
MDP0000778465 Malus domestica MDP0000778465 I 0.890
MLOC_4792 Hordeum vulgare MLOC_4792 I 0.890
BRADI3G40240 Brachypodium distachyon BRADI3G40240 I 0.890
TRIUR3_31982 Triticum urartu TRIUR3_31982 I 0.890
F775_27970 Aegilops tauschii F775_27970 I 0.890
Traes_7AS_0F019FB93 Triticum aestivum Traes_7AS_0F019FB93 I 0.890
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.890
Traes_7DS_AB399594E Triticum aestivum Traes_7DS_AB399594E I 0.890
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.889
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.889
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.889
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.889
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.889
Ca_19449 Cicer arietinum Ca_19449 I 0.889
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.889
Cla018827 Citrullus lanatus Cla018827 I 0.889
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.889
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.887
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.887
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.886
ONIVA08G22940 Oryza nivara ONIVA08G22940 I 0.886
ORUFI08G22780 Oryza rufipogon ORUFI08G22780 I 0.886
SPL15 Oryza indica BGIOSGA028994 I 0.886
SELMODRAFT_28597 Selaginella moellendorffii SELMODRAFT_28597 I 0.886
SELMODRAFT_79699 Selaginella moellendorffii SELMODRAFT_79699 I 0.886
ORGLA08G0179900 Oryza glaberrima ORGLA08G0179900 I 0.886
OPUNC08G18470 Oryza punctata OPUNC08G18470 I 0.886
OGLUM08G21580 Oryza glumaepatula OGLUM08G21580 I 0.886
OLONG_014873 Oryza longistaminata OLONG_014873 I 0.886
OMERI02G02300 Oryza meridionalis OMERI02G02300 I 0.886
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.886
OBART08G20320 Oryza barthii OBART08G20320 I 0.886