30190.m011329 (Ricinus communis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 30190.m011329 T323229_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL3
M07255_2.00
Arabidopsis thaliana
NGTACGGA

TCCGTACN
Dap-seq
OMalley et al.(2016)
SPL3_col_a
0.890 0.773
SPL3
M07256_2.00
Arabidopsis thaliana
NDNTGTACGGAHN

NDTCCGTACANHN
Dap-seq
OMalley et al.(2016)
SPL3_colamp_a
0.890 0.773
SPL3
M02715_2.00
Arabidopsis thaliana
DDDDDNGTACGKHHHH

DDDDMCGTACNHHHHH
SELEX
Mathelier et al.(2014)
MA0577.1
0.890 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30190.m011329 SBP 57 131

Links

Other SBP family TFs
Other Ricinus communis TFs

Invalid Input OrderBy

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action