Aquca_024_00116 (Aquilegia coerulea)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Aquca_024_00116 T323372_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL8
M02714_2.00
Arabidopsis thaliana
DWWDDDGTACRNWNHW

WDNWNYGTACHHHWWH
SELEX
Mathelier et al.(2014)
MA0578.1
0.959 0.840
fgenesh1_pg.scaffold_252000020
M02481_2.00
Physcomitrella patens
NNNKRCVNN

NNBGYMNNN
PBM
Weirauch et al.(2014)
pTH8491
0.929 0.840
fgenesh1_pg.scaffold_194000034
M02480_2.00
Physcomitrella patens
NNNGTACNNN

NNNGTACNNN
PBM
Weirauch et al.(2014)
pTH8580
0.927 0.827
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_024_00116.1 SBP 169 243
Aquca_024_00116.2 SBP 169 243
Aquca_024_00116.3 SBP 169 243

Links

Other SBP family TFs
Other Aquilegia coerulea TFs

Invalid Input OrderBy

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action