Bostr.15697s0063 (Boechera stricta)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Bostr.15697s0063 T323382_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL11
M02471_2.00
Arabidopsis thaliana
NNNHGTACGGWN

NWCCGTACDNNN
PBM
Weirauch et al.(2014)
pTH9392
0.981 0.933
SPL11
M07254_2.00
Arabidopsis thaliana
HTGTACTDDHH

DDHHAGTACAD
Dap-seq
OMalley et al.(2016)
SPL11_col100_a
0.981 0.933
SPL10
M01084_2.00
Arabidopsis thaliana
NNGTACGRHN

NDYCGTACNN
PBM
Sullivan et al.(2014)
pTH9749
0.975 0.933
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.15697s0063.1.p SBP 176 250
Bostr.15697s0063.2.p SBP 139 213

Links

Other SBP family TFs
Other Boechera stricta TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30169.m006454 Ricinus communis 30169.m006454 N 0.000
Ca_17916 Cicer arietinum Ca_17916 N 0.000
Ca_18878 Cicer arietinum Ca_18878 N 0.000
Cla015485 Citrullus lanatus Cla015485 N 0.000
LjSGA_017183.2 Lotus japonicus LjSGA_017183.2 N 0.000
MDP0000471250 Malus domestica MDP0000471250 N 0.000
MDP0000854639 Malus domestica MDP0000854639 N 0.000
mgf017691m Mimulus guttatus mgf017691m N 0.000
mgf020142m Mimulus guttatus mgf020142m N 0.000
Pavir.Cb00930 Panicum virgatum Pavir.Cb00930 N 0.000
PGSC0003DMG400027077 Solanum tuberosum PGSC0003DMG400027077 I 0.000