CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.15697s0063
(
Boechera stricta
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
Bostr.15697s0063
T323382_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL11
M02471_2.00
Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN
PBM
Weirauch et al.(2014)
pTH9392
0.981
0.933
SPL11
M07254_2.00
Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD
Dap-seq
OMalley et al.(2016)
SPL11_col100_a
0.981
0.933
SPL10
M01084_2.00
Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN
PBM
Sullivan et al.(2014)
pTH9749
0.975
0.933
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.15697s0063.1.p
SBP
176
250
CQIDGCDLDLSSAKDYHRKHRVCEKHSKCPKVTVSGLERRFCQQCSRFHAISEFDEKKRSCRKRLSHHNARRRKP
Bostr.15697s0063.2.p
SBP
139
213
CQIDGCDLDLSSAKDYHRKHRVCEKHSKCPKVTVSGLERRFCQQCSRFHAISEFDEKKRSCRKRLSHHNARRRKP
Links
Other
SBP
family TFs
Other
Boechera stricta
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy