Bostr.20903s0042 (Boechera stricta)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Bostr.20903s0042 T323385_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL15
M07263_2.00 		Arabidopsis thaliana
DNWNTGTACGGAHN
NDTCCGTACANWNH		 Dap-seq
OMalley et al.(2016)
SPL15_col_a 		0.985 0.973
SPL15
M07264_2.00 		Arabidopsis thaliana
DNTGTACGGAHNNNN
NNNNDTCCGTACANH		 Dap-seq
OMalley et al.(2016)
SPL15_colamp_a 		0.985 0.973
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.20903s0042.1.p SBP 54 128
Bostr.20903s0042.2.p SBP 2 38
Bostr.20903s0042.3.p SBP 2 38

Links

Other SBP family TFs
Other Boechera stricta TFs

Invalid Input OrderBy

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action