Carubv10002913m.g (Capsella rubella)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Carubv10002913m.g T323410_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL7
M02476_2.00
Arabidopsis thaliana
DGTACKDNN

NNHMGTACH
PBM
Weirauch et al.(2014)
pTH7288
0.980 0.907
SPL7
M00888_2.00
Arabidopsis thaliana
GGRGDAAAGG

CCTTTHCYCC
PBM
Franco-Zorrilla et al.(2014)
SPL7
0.980 0.907
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10002913m SBP 152 226

Links

Other SBP family TFs
Other Capsella rubella TFs

Invalid Input OrderBy

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action