CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Eucgr.D02505
(
Eucalyptus grandis
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
Eucgr.D02505
T323453_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH
DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.897
0.720
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.D02505.1
SBP
126
200
CQVEGCHVALGDAKEYHRRHKVCESHSKAPRVVVLGLEQRFCQQCSRFHQVSEFDDAKRSCRRRLAGHNERRRKS
Links
Other
SBP
family TFs
Other
Eucalyptus grandis
TFs
251 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy