CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000170630
(
Malus domestica
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
MDP0000170630
T323564_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000170630
SBP
61
135
CLVDGCRADLSRCREYHRRHRVCELHSKAPVVVVRGEQKRFCQQCSRFHSLVDFDKVKRSCRKRLNGHNQRRRKP
Links
Other
SBP
family TFs
Other
Malus domestica
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene01338-v1.0-hybrid
Fragaria vesca
gene01338-v1.0-hybrid
I
0.957
MDP0000142582
Malus domestica
MDP0000142582
N
0.948
Pm016138
Prunus mume
Pm016138
I
0.947
PRUPE_ppa007202mg
Prunus persica
PRUPE_ppa007202mg
I
0.946
30147.m014478
Ricinus communis
30147.m014478
I
0.913
PK14243.1
Cannabis sativa
PK14243.1
N
0.895
GSMUA_AchrUn_randomG21900_001
Musa acuminata
GSMUA_AchrUn_randomG21900_001
I
0.893
VIT_14s0068g01780
Vitis vinifera
VIT_14s0068g01780
N
0.892