TF Information

MDP0000176265 *(Malus domestica)* SBP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF03110 (SBP)	IPR004333	MDP0000176265	T323566_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SPL13A M07265_2.00	Arabidopsis thaliana	DNYGTACGGWH	DWCCGTACRNH	Dap-seq OMalley et al.(2016) SPL13_col_a	0.927	0.773
SPL1 M00887_2.00	Arabidopsis thaliana	NGTACGGHN	NDCCGTACN	PBM Franco-Zorrilla et al.(2014) SPL1	0.910	0.720
SPL1 M07259_2.00	Arabidopsis thaliana	NNNBGTACGGW	WCCGTACVNNN	Dap-seq OMalley et al.(2016) SPL1_col_a	0.910	0.720
SPL1 M07260_2.00	Arabidopsis thaliana	NNGTACGKWH	DWMCGTACNN	Dap-seq OMalley et al.(2016) SPL1_colamp_a	0.910	0.720
estExt_fgenesh1_pg.C_1940033 M02479_2.00	Physcomitrella patens	NNGTACGDH	DHCGTACNN	PBM Weirauch et al.(2014) pTH8664	0.903	0.733
AT1G76580 M02473_2.00	Arabidopsis thaliana	NNNRTAYNNN	NNNRTAYNNN	PBM Weirauch et al.(2014) pTH8668	0.894	0.720
PK06791.1 M02482_2.00	Cannabis sativa	NNGTACGRN	NYCGTACNN	PBM Weirauch et al.(2014) pTH9583	0.889	0.680
SPL12 M02475_2.00	Arabidopsis thaliana	NGTACGDN	NHCGTACN	PBM Weirauch et al.(2014) pTH7500	0.889	0.720
PRUPE_ppa000682mg M02478_2.00	Prunus persica	NNNNGTACGD	HCGTACNNNN	PBM Weirauch et al.(2014) pTH9281	0.886	0.707
For this family, TFs with SR scores > 0.885* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
MDP0000176265	SBP	41	115	CLVDGCNSDLSKCRDYHRRHKVCELHSKTSKVTIKGQERRFCQQCSRFHSLVEFDEGKRSCRRRLDGHNKRRRKP

Links
Other SBP family TFs
Other *Malus domestica* TFs

Invalid Input OrderBy

250 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action