MDP0000263766 (Malus domestica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 MDP0000263766 T323579_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH

DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.946 0.867
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000263766 SBP 97 171

Links

Other SBP family TFs
Other Malus domestica TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pm024528 Prunus mume Pm024528 I 0.967
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.967
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.967
Cla002666 Citrullus lanatus Cla002666 I 0.967
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.967
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.967
PK02140.1 Cannabis sativa PK02140.1 I 0.966
Ca_01426 Cicer arietinum Ca_01426 I 0.965
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.965
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.965
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.965
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.964
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.964
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.962
Ca_05711 Cicer arietinum Ca_05711 I 0.962
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.961
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.960
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.960
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.959
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.958
TCM_014668 Theobroma cacao TCM_014668 I 0.958
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.957
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.955
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.954
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.954
Cla019579 Citrullus lanatus Cla019579 I 0.953
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.953
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.952
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.950
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.948
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.947
Bo9g097630 Brassica oleracea Bo9g097630 I 0.947
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.946
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.946
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.946
SPL13A Arabidopsis thaliana AT5G50570 I 0.946
SPL13A Arabidopsis thaliana AT5G50670 D 0.946
Bo3g024180 Brassica oleracea Bo3g024180 I 0.946
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.945
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.945
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.945
29929.m004627 Ricinus communis 29929.m004627 I 0.944
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.943
TCM_008671 Theobroma cacao TCM_008671 I 0.943
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.943
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.942
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.941
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.941
Cla001541 Citrullus lanatus Cla001541 I 0.941
PK19500.1 Cannabis sativa PK19500.1 I 0.941
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.940
Bra022766 Brassica rapa Bra022766 I 0.938
30147.m014478 Ricinus communis 30147.m014478 I 0.936
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.935
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.934
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.933
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.932
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.930
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.930
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.928
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.928
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.927
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.927
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.925
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.925
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.925
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.925
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.925
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.925
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.925
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.925
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.924
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.924
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.923
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.921
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.919
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.918
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.918
Bo3g042890 Brassica oleracea Bo3g042890 I 0.917
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.917
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.913
OS01G0922600 Oryza sativa OS01G0922600 I 0.912
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.909
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.908
MDP0000176265 Malus domestica MDP0000176265 I 0.906
Pm007035 Prunus mume Pm007035 I 0.905
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.905
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.903
OBART01G42150 Oryza barthii OBART01G42150 I 0.903
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.901
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.901
PK17790.1 Cannabis sativa PK17790.1 I 0.900
Si026656m.g Setaria italica Si026656m.g I 0.894
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.894
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.893
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.891
Pm016138 Prunus mume Pm016138 I 0.891
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.891
Si001804m.g Setaria italica Si001804m.g I 0.891
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.890
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.885