MDP0000271587 (Malus domestica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 MDP0000271587 T323581_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL7
M02476_2.00
Arabidopsis thaliana
DGTACKDNN

NNHMGTACH
PBM
Weirauch et al.(2014)
pTH7288
0.946 0.827
SPL7
M00888_2.00
Arabidopsis thaliana
GGRGDAAAGG

CCTTTHCYCC
PBM
Franco-Zorrilla et al.(2014)
SPL7
0.946 0.827
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000271587 SBP 142 216

Links

Other SBP family TFs
Other Malus domestica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
anac099 Arabidopsis thaliana AT5G56620 N 0.000
anac099 Arabidopsis lyrata fgenesh2_kg.8__1569__AT5G56620.1 N 0.000
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.000
Bostr.26833s0596 Boechera stricta Bostr.26833s0596 N 0.000
Bra002802 Brassica rapa Bra002802 N 0.000
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.000
Cagra.4138s0026 Capsella grandiflora Cagra.4138s0026 N 0.000
Carubv10028131m.g Capsella rubella Carubv10028131m.g N 0.000
Cla000384 Citrullus lanatus Cla000384 N 0.000
Cucsa.087480 Cucumis sativus Cucsa.087480 N 0.000
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.000
GRMZM2G115721 Zea mays GRMZM2G115721 N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.000
Lus10012927.g Linum usitatissimum Lus10012927.g N 0.000
Lus10034999.g Linum usitatissimum Lus10034999.g N 0.000
mgf019352m Mimulus guttatus mgf019352m N 0.000
MLOC_72553 Hordeum vulgare MLOC_72553 N 0.000
OBART09G15890 Oryza barthii OBART09G15890 N 0.000
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.000
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.000
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.000
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.000
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N 0.000
OS09G0509100 Oryza sativa OS09G0509100 N 0.000
Pavir.Da00789 Panicum virgatum Pavir.Da00789 N 0.000
Pavir.Db01277 Panicum virgatum Pavir.Db01277 N 0.000
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.000
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.000
Sb03g031000 Sorghum bicolor Sb03g031000 N 0.000
Sb10g022130 Sorghum bicolor Sb10g022130 N 0.000
Si006435m.g Setaria italica Si006435m.g N 0.000
Si030942m.g Setaria italica Si030942m.g N 0.000
Thhalv10015892m.g Eutrema salsugineum Thhalv10015892m.g N 0.000
Traes_7AL_EFD897AFC Triticum aestivum Traes_7AL_EFD897AFC N 0.000
Traes_7DL_1913741A8 Triticum aestivum Traes_7DL_1913741A8 N 0.000