Pavir.Ea01625 (Panicum virgatum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pavir.Ea01625 T323625_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea01625.1.p SBP 131 205
Pavir.Ea01625.2.p SBP 131 205
Pavir.Ea01625.3.p SBP 131 205

Links

Other SBP family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Eb01272 Panicum virgatum Pavir.Eb01272 N 0.987
Si000259m.g Setaria italica Si000259m.g N 0.982
Sb03g011920 Sorghum bicolor Sb03g011920 N 0.981
BRADI2G11240 Brachypodium distachyon BRADI2G11240 N 0.973
GRMZM2G133646 Zea mays GRMZM2G133646 N 0.972
MLOC_34539 Hordeum vulgare MLOC_34539 N 0.955
GRMZM2G081127 Zea mays GRMZM2G081127 N 0.953
ORGLA01G0103500 Oryza glaberrima ORGLA01G0103500 N 0.950
ORUFI01G13230 Oryza rufipogon ORUFI01G13230 N 0.950
SPL1 Oryza sativa OS01G0292900 N 0.950
OPUNC01G11960 Oryza punctata OPUNC01G11960 N 0.950
ONIVA01G14480 Oryza nivara ONIVA01G14480 N 0.950
OBART01G12250 Oryza barthii OBART01G12250 N 0.950
OBART01G12270 Oryza barthii OBART01G12270 N 0.950
OGLUM01G13730 Oryza glumaepatula OGLUM01G13730 N 0.950
OLONG_017800 Oryza longistaminata OLONG_017800 N 0.950
BGIOSGA003313 Oryza indica BGIOSGA003313 N 0.950
OB01G22010 Oryza brachyantha OB01G22010 N 0.948
F775_04036 Aegilops tauschii F775_04036 N 0.921
TRIUR3_24010 Triticum urartu TRIUR3_24010 N 0.921
Traes_7DS_3880F0FD0 Triticum aestivum Traes_7DS_3880F0FD0 N 0.921
Traes_7AS_FB2A769B5 Triticum aestivum Traes_7AS_FB2A769B5 N 0.921
Traes_7BS_7ACA0B10A Triticum aestivum Traes_7BS_7ACA0B10A N 0.921
LPERR01G11190 Leersia perrieri LPERR01G11190 N 0.894