SapurV1A.0118s0110 (Salix purpurea)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 SapurV1A.0118s0110 T323659_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.953 0.747
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN

NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.945 0.747
SPL14
M02470_2.00
Arabidopsis thaliana
NNNRTACNN

NNGTAYNNN
PBM
Weirauch et al.(2014)
pTH8191
0.944 0.733
SPL14
M07253_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL14_col_a
0.944 0.733
SPL14
M11270_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPL14_01
0.944 0.733
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.943 0.733
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.940 0.733
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.940 0.733
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.940 0.733
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN

NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.940 0.880
POPTR_0002s00440
M02477_2.00
Populus trichocarpa
NGTACGG

CCGTACN
PBM
Weirauch et al.(2014)
pTH9280
0.939 0.707
SPL12
M02475_2.00
Arabidopsis thaliana
NGTACGDN

NHCGTACN
PBM
Weirauch et al.(2014)
pTH7500
0.936 0.733
SPL3
M07255_2.00
Arabidopsis thaliana
NGTACGGA

TCCGTACN
Dap-seq
OMalley et al.(2016)
SPL3_col_a
0.936 0.773
SPL3
M07256_2.00
Arabidopsis thaliana
NDNTGTACGGAHN

NDTCCGTACANHN
Dap-seq
OMalley et al.(2016)
SPL3_colamp_a
0.936 0.773
SPL3
M02715_2.00
Arabidopsis thaliana
DDDDDNGTACGKHHHH

DDDDMCGTACNHHHHH
SELEX
Mathelier et al.(2014)
MA0577.1
0.936 0.773
AT1G76580
M02473_2.00
Arabidopsis thaliana
NNNRTAYNNN

NNNRTAYNNN
PBM
Weirauch et al.(2014)
pTH8668
0.931 0.707
SPL5
M02474_2.00
Arabidopsis thaliana
NNGTACGDN

NHCGTACNN
PBM
Weirauch et al.(2014)
pTH7385
0.930 0.773
SPL5
M07261_2.00
Arabidopsis thaliana
NDNYGTACGGAH

DTCCGTACRNHN
Dap-seq
OMalley et al.(2016)
SPL5_col_a
0.930 0.773
SPL5
M07262_2.00
Arabidopsis thaliana
NBGTACGGWH

DWCCGTACVN
Dap-seq
OMalley et al.(2016)
SPL5_colamp_a
0.930 0.773
PRUPE_ppa000682mg
M02478_2.00
Prunus persica
NNNNGTACGD

HCGTACNNNN
PBM
Weirauch et al.(2014)
pTH9281
0.911 0.720
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0118s0110.1.p SBP 76 150
SapurV1A.0118s0110.2.p SBP 76 131

Links

Other SBP family TFs
Other Salix purpurea TFs

429 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.000
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.000
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.000
ASU_12247 Ascaris suum ASU_12247 I 0.000
Bm4236 Brugia malayi Bm4236 I 0.000
BXY_1109100 Bursaphelenchus xylophilus BXY_1109100 N 0.000
CBG14093 Caenorhabditis briggsae CBG14093 I 0.000
CBN06681 Caenorhabditis brenneri CBN06681 I 0.000
CBN25393 Caenorhabditis brenneri CBN25393 I 0.000
CJA18701 Caenorhabditis japonica CJA18701 I 0.000
CRE00458 Caenorhabditis remanei CRE00458 I 0.000
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.000
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.000
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.000
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.000
HCOI00724700 Haemonchus contortus HCOI00724700 I 0.000
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.000
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.000
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.000
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.000
L596_g623 Steinernema carpocapsae L596_g623 I 0.000
L889_g19596 Steinernema feltiae L889_g19596 I 0.000
L892_g2739 Steinernema scapterisci L892_g2739 I 0.000
L893_g11388 Steinernema glaseri L893_g11388 I 0.000
L893_g11389 Steinernema glaseri L893_g11389 I 0.000
L898_g10136 Steinernema monticolum L898_g10136 I 0.000
L898_g24033 Steinernema monticolum L898_g24033 I 0.000
L898_g9710 Steinernema monticolum L898_g9710 I 0.000
LOAG_03108 Loa loa LOAG_03108 I 0.000
MhA1_Contig334.frz3.gene6 Meloidogyne hapla MhA1_Contig334.frz3.gene6 I 0.000
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.000
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.000
NECAME_01009 Necator americanus NECAME_01009 I 0.000
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.000
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.000
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.000
PTRK_0001062600 Parastrongyloides trichosuri PTRK_0001062600 I 0.000
RSKR_0000546900 Rhabditophanes kr3021 RSKR_0000546900 N 0.000
RSKR_0000755800 Rhabditophanes kr3021 RSKR_0000755800 I 0.000
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.000
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.000
SSTP_0001164000 Strongyloides stercoralis SSTP_0001164000 I 0.000
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.000
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.000
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.000
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.000