SapurV1A.0168s0440 (Salix purpurea)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 SapurV1A.0168s0440 T323662_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH

DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.973 0.827
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.918 0.707
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.918 0.707
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.918 0.707
AT1G76580
M02473_2.00
Arabidopsis thaliana
NNNRTAYNNN

NNNRTAYNNN
PBM
Weirauch et al.(2014)
pTH8668
0.904 0.733
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.899 0.707
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.899 0.667
SPL12
M02475_2.00
Arabidopsis thaliana
NGTACGDN

NHCGTACN
PBM
Weirauch et al.(2014)
pTH7500
0.898 0.720
PRUPE_ppa000682mg
M02478_2.00
Prunus persica
NNNNGTACGD

HCGTACNNNN
PBM
Weirauch et al.(2014)
pTH9281
0.898 0.707
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN

NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.891 0.627
SPL14
M02470_2.00
Arabidopsis thaliana
NNNRTACNN

NNGTAYNNN
PBM
Weirauch et al.(2014)
pTH8191
0.888 0.720
SPL14
M07253_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL14_col_a
0.888 0.720
SPL14
M11270_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPL14_01
0.888 0.720
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN

NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.886 0.627
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0168s0440.1.p SBP 94 168
SapurV1A.0168s0440.2.p SBP 94 168

Links

Other SBP family TFs
Other Salix purpurea TFs

Invalid Input OrderBy

395 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action