Thhalv10006058m.g (Eutrema salsugineum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Thhalv10006058m.g T323681_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL15
M07263_2.00
Arabidopsis thaliana
DNWNTGTACGGAHN

NDTCCGTACANWNH
Dap-seq
OMalley et al.(2016)
SPL15_col_a
0.966 0.947
SPL15
M07264_2.00
Arabidopsis thaliana
DNTGTACGGAHNNNN

NNNNDTCCGTACANH
Dap-seq
OMalley et al.(2016)
SPL15_colamp_a
0.966 0.947
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10006058m SBP 64 138

Links

Other SBP family TFs
Other Eutrema salsugineum TFs

Invalid Input OrderBy

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action