Thhalv10018638m.g (Eutrema salsugineum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Thhalv10018638m.g T323693_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.899 0.787
SPL5
M02474_2.00
Arabidopsis thaliana
NNGTACGDN

NHCGTACNN
PBM
Weirauch et al.(2014)
pTH7385
0.892 0.667
SPL5
M07261_2.00
Arabidopsis thaliana
NDNYGTACGGAH

DTCCGTACRNHN
Dap-seq
OMalley et al.(2016)
SPL5_col_a
0.892 0.667
SPL5
M07262_2.00
Arabidopsis thaliana
NBGTACGGWH

DWCCGTACVN
Dap-seq
OMalley et al.(2016)
SPL5_colamp_a
0.892 0.667
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10018638m SBP 132 206

Links

Other SBP family TFs
Other Eutrema salsugineum TFs

Invalid Input OrderBy

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action