BGIOSGA012312 (Oryza indica)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 BGIOSGA012312 T323761_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA012312-PA Sigma 70 303 372

Links

Other Sigma 70 family TFs
Other Oryza indica TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA015860 Oryza indica BGIOSGA015860 N 0.873
BRADI1G66830 Brachypodium distachyon BRADI1G66830 N 0.943
BRADI4G19540 Brachypodium distachyon BRADI4G19540 N 0.886
F775_14570 Aegilops tauschii F775_14570 N 0.886
F775_32094 Aegilops tauschii F775_32094 N 0.957
GRMZM2G003182 Zea mays GRMZM2G003182 N 0.929
GRMZM2G100086 Zea mays GRMZM2G100086 N 0.929
GRMZM2G143392 Zea mays GRMZM2G143392 N 0.859
GRMZM2G164084 Zea mays GRMZM2G164084 N 0.929
LPERR11G10050 Leersia perrieri LPERR11G10050 N 0.873
MLOC_59299 Hordeum vulgare MLOC_59299 N 0.957
OB03G22220 Oryza brachyantha OB03G22220 N 1.000
OB11G19800 Oryza brachyantha OB11G19800 N 0.873
OBART03G12110 Oryza barthii OBART03G12110 N 1.000
OGLUM11G12180 Oryza glumaepatula OGLUM11G12180 N 0.873
OLONG_007716 Oryza longistaminata OLONG_007716 N 1.000
OLONG_012202 Oryza longistaminata OLONG_012202 N 0.873
ONIVA03G13860 Oryza nivara ONIVA03G13860 N 1.000
OPUNC03G11670 Oryza punctata OPUNC03G11670 N 1.000
OPUNC11G10590 Oryza punctata OPUNC11G10590 N 0.859
ORGLA03G0116800 Oryza glaberrima ORGLA03G0116800 N 1.000
ORGLA11G0105900 Oryza glaberrima ORGLA11G0105900 N 0.873
ORUFI11G13080 Oryza rufipogon ORUFI11G13080 N 0.873
OS03G0271100 Oryza sativa OS03G0271100 N 1.000
OS11G0448400 Oryza sativa OS11G0448400 N 0.873
Pavir.Hb00670 Panicum virgatum Pavir.Hb00670 N 0.873
Pavir.Ia03759 Panicum virgatum Pavir.Ia03759 N 0.929
Pavir.J05262 Panicum virgatum Pavir.J05262 N 0.859
Pavir.J38369 Panicum virgatum Pavir.J38369 N 0.929
Sb0010s016080 Sorghum bicolor Sb0010s016080 N 0.859
Sb01g039810 Sorghum bicolor Sb01g039810 N 0.943
Si026193m.g Setaria italica Si026193m.g N 0.859
Si035112m.g Setaria italica Si035112m.g N 0.929
Traes_4AL_26117D669 Triticum aestivum Traes_4AL_26117D669 N 0.886
Traes_4AS_26117D669 Triticum aestivum Traes_4AS_26117D669 N 0.886
Traes_4AS_DE644E0CF Triticum aestivum Traes_4AS_DE644E0CF N 0.957
Traes_4BL_9CB9E3F96 Triticum aestivum Traes_4BL_9CB9E3F96 N 0.886
Traes_4DL_65B3128BF Triticum aestivum Traes_4DL_65B3128BF N 0.886
Traes_4DL_B8D22E4C2 Triticum aestivum Traes_4DL_B8D22E4C2 N 0.957
TRIUR3_30646 Triticum urartu TRIUR3_30646 N 0.886