Bo5g009070 (Brassica oleracea)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Bo5g009070 T323775_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g009070.1 Sigma 70 344 414

Links

Other Sigma 70 family TFs
Other Brassica oleracea TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra018617 Brassica rapa Bra018617 N 1.000
Cagra.4395s0044 Capsella grandiflora Cagra.4395s0044 N 0.972
Carubv10008711m.g Capsella rubella Carubv10008711m.g N 0.972
Thhalv10007187m.g Eutrema salsugineum Thhalv10007187m.g N 0.972
Bostr.25219s0090 Boechera stricta Bostr.25219s0090 N 0.972
SIGB Arabidopsis lyrata fgenesh2_kg.1__869__AT1G08540.1 N 0.972
SIGB Arabidopsis thaliana AT1G08540 N 0.972
Bra030732 Brassica rapa Bra030732 N 0.972
mgf015824m Mimulus guttatus mgf015824m N 0.958
TCM_025741 Theobroma cacao TCM_025741 N 0.944
SIGB Vitis vinifera VIT_15s0024g00640 N 0.944
PK16345.1 Cannabis sativa PK16345.1 N 0.944
30148.m001412 Ricinus communis 30148.m001412 N 0.944
evm.TU.supercontig_73.29 Carica papaya evm.TU.supercontig_73.29 N 0.944
Cla007091 Citrullus lanatus Cla007091 N 0.944
chr1.CM0017.250.nc Lotus japonicus chr1.CM0017.250.nc N 0.944
gene17946-v1.0-hybrid Fragaria vesca gene17946-v1.0-hybrid N 0.944
PGSC0003DMG400031111 Solanum tuberosum PGSC0003DMG400031111 N 0.944
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.930
SapurV1A.1953s0020 Salix purpurea SapurV1A.1953s0020 N 0.930
orange1.1g007404m.g Citrus sinensis orange1.1g007404m.g N 0.930
Eucgr.D01094 Eucalyptus grandis Eucgr.D01094 N 0.930
Ciclev10030998m.g Citrus clementina Ciclev10030998m.g N 0.930
cassava14033.valid.m1 Manihot esculenta cassava14033.valid.m1 N 0.930
PRUPE_ppa006657mg Prunus persica PRUPE_ppa006657mg N 0.930
Pm025497 Prunus mume Pm025497 N 0.930
Solyc01g081490.2 Solanum lycopersicum Solyc01g081490.2 N 0.930
Cucsa.362600 Cucumis sativus Cucsa.362600 N 0.930
SapurV1A.1189s0050 Salix purpurea SapurV1A.1189s0050 N 0.915
Aquca_013_00876 Aquilegia coerulea Aquca_013_00876 N 0.915
AMTR_s00011p00258380 Amborella trichopoda AMTR_s00011p00258380 N 0.915
GLYMA04G00330 Glycine max GLYMA04G00330 N 0.915
MDP0000157652 Malus domestica MDP0000157652 N 0.915
POPTR_0019s06100 Populus trichocarpa POPTR_0019s06100 N 0.901
POPTR_0013s06770 Populus trichocarpa POPTR_0013s06770 N 0.901
MTR_3g118290 Medicago truncatula MTR_3g118290 N 0.887
GSMUA_Achr7G04860_001 Musa acuminata GSMUA_Achr7G04860_001 N 0.873
Gorai.004G253700 Gossypium raimondii Gorai.004G253700 N 0.873
Ca_04693 Cicer arietinum Ca_04693 N 0.873
GSMUA_Achr7G17330_001 Musa acuminata GSMUA_Achr7G17330_001 N 0.859
Lus10005668.g Linum usitatissimum Lus10005668.g N 0.803
Lus10020325.g Linum usitatissimum Lus10020325.g N 0.803
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.761
Si035112m.g Setaria italica Si035112m.g N 0.700