GLYMA03G33970 (Glycine max)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GLYMA03G33970 T323832_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA03G33970.1 Sigma 70 318 388

Links

Other Sigma 70 family TFs
Other Glycine max TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA19G36710 Glycine max GLYMA19G36710 N 0.972
cassava35219.m1 Manihot esculenta cassava35219.m1 N 0.831
Cla018594 Citrullus lanatus Cla018594 N 0.817
30078.m002307 Ricinus communis 30078.m002307 N 0.817
Pm030137 Prunus mume Pm030137 N 0.803
Cucsa.124610 Cucumis sativus Cucsa.124610 N 0.803
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N 0.803
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N 0.803
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N 0.803
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N 0.789
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N 0.789
gene09615-v1.0-hybrid Fragaria vesca gene09615-v1.0-hybrid N 0.789
SIGF Vitis vinifera VIT_08s0040g01560 N 0.789
MTR_7g101840 Medicago truncatula MTR_7g101840 N 0.789
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N 0.775
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N 0.775
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N 0.775
GLYMA05G22730 Glycine max GLYMA05G22730 N 0.775
GLYMA10G06500 Glycine max GLYMA10G06500 N 0.775
SapurV1A.0141s0230 Salix purpurea SapurV1A.0141s0230 N 0.761
Ca_17153 Cicer arietinum Ca_17153 N 0.761
GLYMA13G20700 Glycine max GLYMA13G20700 N 0.761
TCM_022198 Theobroma cacao TCM_022198 N 0.761
Ca_12052 Cicer arietinum Ca_12052 N 0.761
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N 0.746
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N 0.732
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N 0.732
SIGF Arabidopsis thaliana AT2G36990 N 0.732
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N 0.732
Bo4g186560 Brassica oleracea Bo4g186560 N 0.732
Carubv10022939m.g Capsella rubella Carubv10022939m.g N 0.732
MTR_1g063850 Medicago truncatula MTR_1g063850 N 0.732
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N 0.732
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N 0.732
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N 0.730
Aquca_053_00136 Aquilegia coerulea Aquca_053_00136 N 0.721
mgf007606m Mimulus guttatus mgf007606m N 0.718
Bra017213 Brassica rapa Bra017213 N 0.718
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N 0.718
Aquca_030_00101 Aquilegia coerulea Aquca_030_00101 N 0.706