GRMZM2G143392 (Zea mays)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GRMZM2G143392 T323851_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G143392_P01 Sigma 70 302 372

Links

Other Sigma 70 family TFs
Other Zea mays TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA012312 Oryza indica BGIOSGA012312 N 0.859
BGIOSGA015860 Oryza indica BGIOSGA015860 N 0.958
BRADI1G66830 Brachypodium distachyon BRADI1G66830 N 0.871
BRADI4G19540 Brachypodium distachyon BRADI4G19540 N 0.929
F775_14570 Aegilops tauschii F775_14570 N 0.929
F775_32094 Aegilops tauschii F775_32094 N 0.857
GRMZM2G003182 Zea mays GRMZM2G003182 N 0.857
GRMZM2G100086 Zea mays GRMZM2G100086 N 0.857
GRMZM2G164084 Zea mays GRMZM2G164084 N 0.857
LPERR11G10050 Leersia perrieri LPERR11G10050 N 0.958
MLOC_59299 Hordeum vulgare MLOC_59299 N 0.857
OB03G22220 Oryza brachyantha OB03G22220 N 0.859
OB11G19800 Oryza brachyantha OB11G19800 N 0.958
OBART03G12110 Oryza barthii OBART03G12110 N 0.859
OGLUM11G12180 Oryza glumaepatula OGLUM11G12180 N 0.958
OLONG_007716 Oryza longistaminata OLONG_007716 N 0.859
OLONG_012202 Oryza longistaminata OLONG_012202 N 0.958
ONIVA03G13860 Oryza nivara ONIVA03G13860 N 0.859
OPUNC03G11670 Oryza punctata OPUNC03G11670 N 0.859
OPUNC11G10590 Oryza punctata OPUNC11G10590 N 0.944
ORGLA03G0116800 Oryza glaberrima ORGLA03G0116800 N 0.859
ORGLA11G0105900 Oryza glaberrima ORGLA11G0105900 N 0.958
ORUFI11G13080 Oryza rufipogon ORUFI11G13080 N 0.958
OS03G0271100 Oryza sativa OS03G0271100 N 0.859
OS11G0448400 Oryza sativa OS11G0448400 N 0.958
Pavir.Hb00670 Panicum virgatum Pavir.Hb00670 N 0.958
Pavir.Ia03759 Panicum virgatum Pavir.Ia03759 N 0.871
Pavir.J05262 Panicum virgatum Pavir.J05262 N 0.972
Pavir.J38369 Panicum virgatum Pavir.J38369 N 0.845
Sb0010s016080 Sorghum bicolor Sb0010s016080 N 0.972
Sb01g039810 Sorghum bicolor Sb01g039810 N 0.859
Si026193m.g Setaria italica Si026193m.g N 0.972
Si035112m.g Setaria italica Si035112m.g N 0.886
Traes_4AL_26117D669 Triticum aestivum Traes_4AL_26117D669 N 0.929
Traes_4AS_26117D669 Triticum aestivum Traes_4AS_26117D669 N 0.929
Traes_4AS_DE644E0CF Triticum aestivum Traes_4AS_DE644E0CF N 0.857
Traes_4BL_9CB9E3F96 Triticum aestivum Traes_4BL_9CB9E3F96 N 0.929
Traes_4DL_65B3128BF Triticum aestivum Traes_4DL_65B3128BF N 0.929
Traes_4DL_B8D22E4C2 Triticum aestivum Traes_4DL_B8D22E4C2 N 0.857
TRIUR3_30646 Triticum urartu TRIUR3_30646 N 0.929