GSMUA_Achr4G30300_001 (Musa acuminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GSMUA_Achr4G30300_001 T323862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P30300_001 Sigma 70 1 37

Links

Other Sigma 70 family TFs
Other Musa acuminata TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N 0.865
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N 0.838
PDK_20s1626471g002 Phoenix dactylifera PDK_20s1626471g002 N 0.838
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N 0.838
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N 0.811
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N 0.811
Cla018594 Citrullus lanatus Cla018594 N 0.811
Bo4g186560 Brassica oleracea Bo4g186560 N 0.811
Carubv10022939m.g Capsella rubella Carubv10022939m.g N 0.811
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N 0.811
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N 0.811
SIGF Arabidopsis thaliana AT2G36990 N 0.811
Pm030137 Prunus mume Pm030137 N 0.784
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N 0.784
Bra017213 Brassica rapa Bra017213 N 0.784
SapurV1A.0141s0230 Salix purpurea SapurV1A.0141s0230 N 0.784
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N 0.784
Aquca_053_00136 Aquilegia coerulea Aquca_053_00136 N 0.784
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N 0.784
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N 0.784
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N 0.784
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N 0.757
Cucsa.124610 Cucumis sativus Cucsa.124610 N 0.757
30078.m002307 Ricinus communis 30078.m002307 N 0.757
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N 0.757
mgf007606m Mimulus guttatus mgf007606m N 0.757
SIGF Vitis vinifera VIT_08s0040g01560 N 0.757
OB08G17050 Oryza brachyantha OB08G17050 N 0.730
OBART08G07320 Oryza barthii OBART08G07320 N 0.730
OGLUM08G08160 Oryza glumaepatula OGLUM08G08160 N 0.730
OMERI03G18460 Oryza meridionalis OMERI03G18460 N 0.730
LPERR08G06520 Leersia perrieri LPERR08G06520 N 0.730
Pavir.Ib04452 Panicum virgatum Pavir.Ib04452 N 0.730
GLYMA03G33970 Glycine max GLYMA03G33970 N 0.730
GLYMA19G36710 Glycine max GLYMA19G36710 N 0.730
GRMZM2G144196 Zea mays GRMZM2G144196 N 0.730
ONIVA08G08070 Oryza nivara ONIVA08G08070 N 0.730
OLONG_007958 Oryza longistaminata OLONG_007958 N 0.730
Sb01g000390 Sorghum bicolor Sb01g000390 N 0.730
OPUNC08G07030 Oryza punctata OPUNC08G07030 N 0.730
BGIOSGA028267 Oryza indica BGIOSGA028267 N 0.730
OS08G0242800 Oryza sativa OS08G0242800 N 0.730
ORUFI08G08440 Oryza rufipogon ORUFI08G08440 N 0.730
Si034994m.g Setaria italica Si034994m.g N 0.730
Aquca_030_00101 Aquilegia coerulea Aquca_030_00101 N 0.730
ORGLA08G0064000 Oryza glaberrima ORGLA08G0064000 N 0.730
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N 0.703
cassava35219.m1 Manihot esculenta cassava35219.m1 N 0.703
TCM_022198 Theobroma cacao TCM_022198 N 0.703
Gorai.006G165200 Gossypium raimondii Gorai.006G165200 N 0.703
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N 0.703
Pavir.Ha01929 Panicum virgatum Pavir.Ha01929 N 0.703
Pavir.Ia00050 Panicum virgatum Pavir.Ia00050 N 0.703