CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr7G04860_001
(
Musa acuminata
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
GSMUA_Achr7G04860_001
T323863_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr7P04860_001
Sigma 70
314
384
MITSNIRLVISIAKNYQHAGMNLQDLVQEGCRGLIKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRT
Links
Other
Sigma 70
family TFs
Other
Musa acuminata
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.6121
Candida albicans
CaO19.6121
D
0.000
RO3G_07016
Rhizopus oryzae
RO3G_07016
D
0.000
GNLVRS01_PISO0L16555g
Millerozyma farinosa
GNLVRS01_PISO0L16555g
I
0.000
KAFR_0B02160
Kazachstania africana
KAFR_0B02160
I
0.000
KLTH0E06688g
Lachancea thermotolerans
KLTH0E06688g
I
0.000
KNAG_0D02120
Kazachstania naganishii
KNAG_0D02120
I
0.000
CPAG_00149
Candida parapsilosis
CPAG_00149
I
0.000
SPAPADRAFT_59332
Spathaspora passalidarum
SPAPADRAFT_59332
I
0.000
ZYRO0G19140g
Zygosaccharomyces rouxii
ZYRO0G19140g
I
0.000
estExt_fgenesh1_pg.C_chr_7.10133
Pichia stipitis
estExt_fgenesh1_pg.C_chr_7.10133
I
0.000
KLTH0E06688g
Kluyveromyces thermotolerans
KLTH0E06688g
I
0.000
GNLVRS01_PISO0K16554g
Millerozyma farinosa
GNLVRS01_PISO0K16554g
I
0.000
G210_4804
Candida maltosa
G210_4804
I
0.000
AACERI_AaceriACL057W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriACL057W
I
0.000
AGOS_ACL057W
Ashbya gossypii
AGOS_ACL057W
I
0.000
CaO19.13540
Candida albicans
CaO19.13540
I
0.000
CD36_33070
Candida dubliniensis
CD36_33070
I
0.000
CORT_0D04470
Candida orthopsilosis
CORT_0D04470
I
0.000
CTRG_03074
Candida tropicalis
CTRG_03074
I
0.000
DEHA2E03828g
Debaryomyces hansenii
DEHA2E03828g
I
0.000
Kwal_17241
Kluyveromyces waltii
Kwal_17241
I
0.000
PGUG_03478
Meyerozyma guilliermondii
PGUG_03478
N
0.000
TBLA_0F00370
Tetrapisispora blattae
TBLA_0F00370
N
0.000
PGUG_03478
Candida guilliermondii
PGUG_03478
N
0.000