GSMUA_Achr7G04860_001 (Musa acuminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GSMUA_Achr7G04860_001 T323863_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P04860_001 Sigma 70 314 384

Links

Other Sigma 70 family TFs
Other Musa acuminata TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30148.m001412 Ricinus communis 30148.m001412 N 0.930
AMTR_s00011p00258380 Amborella trichopoda AMTR_s00011p00258380 N 0.873
Aquca_013_00876 Aquilegia coerulea Aquca_013_00876 N 0.901
BGIOSGA015860 Oryza indica BGIOSGA015860 N 0.718
Bo5g009070 Brassica oleracea Bo5g009070 N 0.873
Bostr.25219s0090 Boechera stricta Bostr.25219s0090 N 0.901
Bra018617 Brassica rapa Bra018617 N 0.873
Bra030732 Brassica rapa Bra030732 N 0.901
BRADI4G19540 Brachypodium distachyon BRADI4G19540 N 0.700
Cagra.4395s0044 Capsella grandiflora Cagra.4395s0044 N 0.901
Carubv10008711m.g Capsella rubella Carubv10008711m.g N 0.901
cassava14033.valid.m1 Manihot esculenta cassava14033.valid.m1 N 0.944
Ca_04693 Cicer arietinum Ca_04693 N 0.859
chr1.CM0017.250.nc Lotus japonicus chr1.CM0017.250.nc N 0.930
Ciclev10030998m.g Citrus clementina Ciclev10030998m.g N 0.944
Cla007091 Citrullus lanatus Cla007091 N 0.930
Cucsa.362600 Cucumis sativus Cucsa.362600 N 0.915
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.718
Eucgr.D01094 Eucalyptus grandis Eucgr.D01094 N 0.915
evm.TU.supercontig_73.29 Carica papaya evm.TU.supercontig_73.29 N 0.930
F775_14570 Aegilops tauschii F775_14570 N 0.700
gene17946-v1.0-hybrid Fragaria vesca gene17946-v1.0-hybrid N 0.930
GLYMA04G00330 Glycine max GLYMA04G00330 N 0.901
Gorai.004G253700 Gossypium raimondii Gorai.004G253700 N 0.915
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.944
GSMUA_Achr7G17330_001 Musa acuminata GSMUA_Achr7G17330_001 N 0.901
LPERR11G10050 Leersia perrieri LPERR11G10050 N 0.718
Lus10001339.g Linum usitatissimum Lus10001339.g N 0.746
Lus10005668.g Linum usitatissimum Lus10005668.g N 0.831
Lus10013642.g Linum usitatissimum Lus10013642.g N 0.746
Lus10020325.g Linum usitatissimum Lus10020325.g N 0.831
MDP0000157652 Malus domestica MDP0000157652 N 0.901
mgf015824m Mimulus guttatus mgf015824m N 0.915
MTR_3g118290 Medicago truncatula MTR_3g118290 N 0.873
OB11G19800 Oryza brachyantha OB11G19800 N 0.718
OGLUM11G12180 Oryza glumaepatula OGLUM11G12180 N 0.718
OLONG_012202 Oryza longistaminata OLONG_012202 N 0.718
OPUNC11G10590 Oryza punctata OPUNC11G10590 N 0.704
orange1.1g007404m.g Citrus sinensis orange1.1g007404m.g N 0.944
ORGLA11G0105900 Oryza glaberrima ORGLA11G0105900 N 0.718
ORUFI11G13080 Oryza rufipogon ORUFI11G13080 N 0.718
OS11G0448400 Oryza sativa OS11G0448400 N 0.718
Pavir.Hb00670 Panicum virgatum Pavir.Hb00670 N 0.718
Pavir.Ia03759 Panicum virgatum Pavir.Ia03759 N 0.700
Pavir.J05262 Panicum virgatum Pavir.J05262 N 0.718
PGSC0003DMG400031111 Solanum tuberosum PGSC0003DMG400031111 N 0.873
PK16345.1 Cannabis sativa PK16345.1 N 0.930
Pm025497 Prunus mume Pm025497 N 0.915
POPTR_0013s06770 Populus trichocarpa POPTR_0013s06770 N 0.887
POPTR_0019s06100 Populus trichocarpa POPTR_0019s06100 N 0.887
PRUPE_ppa006657mg Prunus persica PRUPE_ppa006657mg N 0.915
SapurV1A.1189s0050 Salix purpurea SapurV1A.1189s0050 N 0.901
SapurV1A.1953s0020 Salix purpurea SapurV1A.1953s0020 N 0.915
Sb0010s016080 Sorghum bicolor Sb0010s016080 N 0.718
Si026193m.g Setaria italica Si026193m.g N 0.718
SIGB Vitis vinifera VIT_15s0024g00640 N 0.915
SIGB Arabidopsis thaliana AT1G08540 N 0.901
SIGB Arabidopsis lyrata fgenesh2_kg.1__869__AT1G08540.1 N 0.901
Solyc01g081490.2 Solanum lycopersicum Solyc01g081490.2 N 0.887
TCM_025741 Theobroma cacao TCM_025741 N 0.930
Thhalv10007187m.g Eutrema salsugineum Thhalv10007187m.g N 0.901
Traes_4AL_26117D669 Triticum aestivum Traes_4AL_26117D669 N 0.700
Traes_4AS_26117D669 Triticum aestivum Traes_4AS_26117D669 N 0.700
Traes_4BL_9CB9E3F96 Triticum aestivum Traes_4BL_9CB9E3F96 N 0.700
Traes_4DL_65B3128BF Triticum aestivum Traes_4DL_65B3128BF N 0.700
TRIUR3_30646 Triticum urartu TRIUR3_30646 N 0.700