GSMUA_Achr7G17330_001 (Musa acuminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GSMUA_Achr7G17330_001 T323864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P17330_001 Sigma 70 314 384

Links

Other Sigma 70 family TFs
Other Musa acuminata TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30148.m001412 Ricinus communis 30148.m001412 N 0.901
AMTR_s00011p00258380 Amborella trichopoda AMTR_s00011p00258380 N 0.901
Aquca_013_00876 Aquilegia coerulea Aquca_013_00876 N 0.873
Bo5g009070 Brassica oleracea Bo5g009070 N 0.859
Bostr.25219s0090 Boechera stricta Bostr.25219s0090 N 0.873
Bra018617 Brassica rapa Bra018617 N 0.859
Bra030732 Brassica rapa Bra030732 N 0.873
Cagra.4395s0044 Capsella grandiflora Cagra.4395s0044 N 0.873
Carubv10008711m.g Capsella rubella Carubv10008711m.g N 0.873
cassava14033.valid.m1 Manihot esculenta cassava14033.valid.m1 N 0.915
Ca_04693 Cicer arietinum Ca_04693 N 0.859
chr1.CM0017.250.nc Lotus japonicus chr1.CM0017.250.nc N 0.901
Ciclev10030998m.g Citrus clementina Ciclev10030998m.g N 0.887
Cla007091 Citrullus lanatus Cla007091 N 0.901
Cucsa.362600 Cucumis sativus Cucsa.362600 N 0.887
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.732
Eucgr.D01094 Eucalyptus grandis Eucgr.D01094 N 0.887
evm.TU.supercontig_73.29 Carica papaya evm.TU.supercontig_73.29 N 0.901
gene17946-v1.0-hybrid Fragaria vesca gene17946-v1.0-hybrid N 0.901
GLYMA04G00330 Glycine max GLYMA04G00330 N 0.873
Gorai.004G253700 Gossypium raimondii Gorai.004G253700 N 0.859
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.887
GSMUA_Achr7G04860_001 Musa acuminata GSMUA_Achr7G04860_001 N 0.901
Lus10001339.g Linum usitatissimum Lus10001339.g N 0.704
Lus10005668.g Linum usitatissimum Lus10005668.g N 0.845
Lus10013642.g Linum usitatissimum Lus10013642.g N 0.704
Lus10020325.g Linum usitatissimum Lus10020325.g N 0.845
MDP0000157652 Malus domestica MDP0000157652 N 0.873
mgf015824m Mimulus guttatus mgf015824m N 0.887
MTR_3g118290 Medicago truncatula MTR_3g118290 N 0.873
orange1.1g007404m.g Citrus sinensis orange1.1g007404m.g N 0.887
PDK_20s1327663g001 Phoenix dactylifera PDK_20s1327663g001 N 0.706
PGSC0003DMG400031111 Solanum tuberosum PGSC0003DMG400031111 N 0.845
PK16345.1 Cannabis sativa PK16345.1 N 0.901
Pm025497 Prunus mume Pm025497 N 0.887
POPTR_0013s06770 Populus trichocarpa POPTR_0013s06770 N 0.859
POPTR_0019s06100 Populus trichocarpa POPTR_0019s06100 N 0.887
PRUPE_ppa006657mg Prunus persica PRUPE_ppa006657mg N 0.887
SapurV1A.0671s0070 Salix purpurea SapurV1A.0671s0070 N 0.867
SapurV1A.1189s0050 Salix purpurea SapurV1A.1189s0050 N 0.873
SapurV1A.1953s0020 Salix purpurea SapurV1A.1953s0020 N 0.887
SIGB Arabidopsis lyrata fgenesh2_kg.1__869__AT1G08540.1 N 0.873
SIGB Vitis vinifera VIT_15s0024g00640 N 0.887
SIGB Arabidopsis thaliana AT1G08540 N 0.873
Solyc01g081490.2 Solanum lycopersicum Solyc01g081490.2 N 0.859
TCM_025741 Theobroma cacao TCM_025741 N 0.901
Thhalv10007187m.g Eutrema salsugineum Thhalv10007187m.g N 0.873