MTR_3g033420 (Medicago truncatula)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 MTR_3g033420 T323879_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES69690 Sigma 70 170 240

Links

Other Sigma 70 family TFs
Other Medicago truncatula TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SIGD Arabidopsis thaliana AT5G13730 N 0.732
Aquca_014_00805 Aquilegia coerulea Aquca_014_00805 N 0.732
Bostr.2902s0107 Boechera stricta Bostr.2902s0107 N 0.732
Cagra.0596s0063 Capsella grandiflora Cagra.0596s0063 N 0.732
Carubv10001054m.g Capsella rubella Carubv10001054m.g N 0.732
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.761
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.718
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.704
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.732
PK06863.1 Cannabis sativa PK06863.1 N 0.704
Cucsa.248920 Cucumis sativus Cucsa.248920 N 0.746
Pm016510 Prunus mume Pm016510 N 0.704
Bo2g011520 Brassica oleracea Bo2g011520 N 0.732
Bo9g166510 Brassica oleracea Bo9g166510 N 0.732
Bra008807 Brassica rapa Bra008807 N 0.732
Bra023430 Brassica rapa Bra023430 N 0.732
GSMUA_Achr4G18530_001 Musa acuminata GSMUA_Achr4G18530_001 N 0.704
PRUPE_ppa017025mg Prunus persica PRUPE_ppa017025mg N 0.704
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.718
Ca_22857 Cicer arietinum Ca_22857 N 0.887
Cla017559 Citrullus lanatus Cla017559 N 0.732
LjSGA_045184.1 Lotus japonicus LjSGA_045184.1 N 0.859