CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB03G22220
(
Oryza brachyantha
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
OB03G22220
T323884_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB03G22220.1
Sigma 70
296
365
MVKSNVRLVISIAREFEGPGMEFSDLIQEGIQGLVRGAEKFDASKGFRFSTYSHWWIKQAIRKSVLEQTQ
Links
Other
Sigma 70
family TFs
Other
Oryza brachyantha
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G45590
Brachypodium distachyon
BRADI3G45590
N
0.000
LPERR02G16200
Leersia perrieri
LPERR02G16200
N
0.000
OBART02G20190
Oryza barthii
OBART02G20190
N
0.000
ORGLA02G0173200
Oryza glaberrima
ORGLA02G0173200
N
0.000
OGLUM02G20510
Oryza glumaepatula
OGLUM02G20510
N
0.000
BGIOSGA008411
Oryza indica
BGIOSGA008411
N
0.000
OLONG_002405
Oryza longistaminata
OLONG_002405
N
0.000
ONIVA02G22300
Oryza nivara
ONIVA02G22300
N
0.000
OPUNC02G18120
Oryza punctata
OPUNC02G18120
N
0.000
ORUFI02G21320
Oryza rufipogon
ORUFI02G21320
N
0.000
OS02G0551900
Oryza sativa
OS02G0551900
N
0.000
Traes_6BL_CC009B78A
Triticum aestivum
Traes_6BL_CC009B78A
N
0.000
Traes_6DL_F47CFC6D9
Triticum aestivum
Traes_6DL_F47CFC6D9
N
0.000
GRMZM5G885700
Zea mays
GRMZM5G885700
N
0.000