OB05G35020 (Oryza brachyantha)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OB05G35020 T323885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB05G35020.1 Sigma 70 504 575

Links

Other Sigma 70 family TFs
Other Oryza brachyantha TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OMERI05G23510 Oryza meridionalis OMERI05G23510 N 0.971
OLONG_028119 Oryza longistaminata OLONG_028119 N 0.971
OGLUM05G29030 Oryza glumaepatula OGLUM05G29030 N 0.971
OBART05G27520 Oryza barthii OBART05G27520 N 0.971
ONIVA05G29570 Oryza nivara ONIVA05G29570 N 0.971
OPUNC05G25110 Oryza punctata OPUNC05G25110 N 0.971
BGIOSGA020460 Oryza indica BGIOSGA020460 N 0.971
LPERR05G23180 Leersia perrieri LPERR05G23180 N 0.971
ORUFI05G29480 Oryza rufipogon ORUFI05G29480 N 0.971
ORGLA05G0239100 Oryza glaberrima ORGLA05G0239100 N 0.971
Pavir.J13718 Panicum virgatum Pavir.J13718 N 0.957
Si021904m.g Setaria italica Si021904m.g N 0.957
Sb09g030110 Sorghum bicolor Sb09g030110 N 0.913
F775_08366 Aegilops tauschii F775_08366 N 0.870
Traes_1AL_0C41C44B1 Triticum aestivum Traes_1AL_0C41C44B1 N 0.870
MLOC_61094 Hordeum vulgare MLOC_61094 N 0.870
TRIUR3_33378 Triticum urartu TRIUR3_33378 N 0.870
GRMZM2G077436 Zea mays GRMZM2G077436 N 0.855
POPTR_0015s02320 Populus trichocarpa POPTR_0015s02320 N 0.771
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N 0.768
TCM_015349 Theobroma cacao TCM_015349 N 0.754
SIGE Vitis vinifera VIT_16s0050g02520 N 0.754
Cla004302 Citrullus lanatus Cla004302 N 0.754
Lus10014934.g Linum usitatissimum Lus10014934.g N 0.754
mgf001401m Mimulus guttatus mgf001401m N 0.754
Cucsa.012950 Cucumis sativus Cucsa.012950 N 0.754
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N 0.754
Ca_03953 Cicer arietinum Ca_03953 N 0.754
GLYMA06G13100 Glycine max GLYMA06G13100 N 0.754
MDP0000831937 Malus domestica MDP0000831937 N 0.739
GLYMA13G08390 Glycine max GLYMA13G08390 N 0.739
mgf006107m Mimulus guttatus mgf006107m N 0.739
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N 0.739
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N 0.739
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N 0.739
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N 0.739
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N 0.739
GLYMA04G41691 Glycine max GLYMA04G41691 N 0.739
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N 0.739
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N 0.739
PK06897.1 Cannabis sativa PK06897.1 N 0.725
Thhalv10004166m.g Eutrema salsugineum Thhalv10004166m.g N 0.725
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N 0.725
Bo9g013770 Brassica oleracea Bo9g013770 N 0.725
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N 0.725
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N 0.725
Bostr.10199s0021 Boechera stricta Bostr.10199s0021 N 0.725
Carubv10000608m.g Capsella rubella Carubv10000608m.g N 0.725
SIGE Arabidopsis lyrata fgenesh2_kg.6__2403__AT5G24120.1 N 0.725
GLYMA14G31370 Glycine max GLYMA14G31370 N 0.725
Solyc03g007370.2 Solanum lycopersicum Solyc03g007370.2 N 0.725
Cagra.8922s0001 Capsella grandiflora Cagra.8922s0001 N 0.725
SIGE Arabidopsis thaliana AT5G24120 N 0.725
Bra026466 Brassica rapa Bra026466 N 0.725
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N 0.714
30169.m006532 Ricinus communis 30169.m006532 N 0.710
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N 0.710
MTR_3g090900 Medicago truncatula MTR_3g090900 N 0.710
BRADI2G14790 Brachypodium distachyon BRADI2G14790 N 0.704