ONIVA03G13860 (Oryza nivara)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 ONIVA03G13860 T323910_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA03G13860.1 Sigma 70 303 372

Links

Other Sigma 70 family TFs
Other Oryza nivara TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC03G11670 Oryza punctata OPUNC03G11670 N 1.000
OLONG_007716 Oryza longistaminata OLONG_007716 N 1.000
BGIOSGA012312 Oryza indica BGIOSGA012312 N 1.000
ORGLA03G0116800 Oryza glaberrima ORGLA03G0116800 N 1.000
OS03G0271100 Oryza sativa OS03G0271100 N 1.000
OBART03G12110 Oryza barthii OBART03G12110 N 1.000
OB03G22220 Oryza brachyantha OB03G22220 N 1.000
MLOC_59299 Hordeum vulgare MLOC_59299 N 0.957
Traes_4AS_DE644E0CF Triticum aestivum Traes_4AS_DE644E0CF N 0.957
Traes_4DL_B8D22E4C2 Triticum aestivum Traes_4DL_B8D22E4C2 N 0.957
F775_32094 Aegilops tauschii F775_32094 N 0.957
Sb01g039810 Sorghum bicolor Sb01g039810 N 0.943
BRADI1G66830 Brachypodium distachyon BRADI1G66830 N 0.943
Pavir.J38369 Panicum virgatum Pavir.J38369 N 0.929
GRMZM2G164084 Zea mays GRMZM2G164084 N 0.929
GRMZM2G100086 Zea mays GRMZM2G100086 N 0.929
Si035112m.g Setaria italica Si035112m.g N 0.929
Pavir.Ia03759 Panicum virgatum Pavir.Ia03759 N 0.929
GRMZM2G003182 Zea mays GRMZM2G003182 N 0.929
Traes_4AL_26117D669 Triticum aestivum Traes_4AL_26117D669 N 0.886
TRIUR3_30646 Triticum urartu TRIUR3_30646 N 0.886
F775_14570 Aegilops tauschii F775_14570 N 0.886
Traes_4DL_65B3128BF Triticum aestivum Traes_4DL_65B3128BF N 0.886
Traes_4BL_9CB9E3F96 Triticum aestivum Traes_4BL_9CB9E3F96 N 0.886
BRADI4G19540 Brachypodium distachyon BRADI4G19540 N 0.886
Traes_4AS_26117D669 Triticum aestivum Traes_4AS_26117D669 N 0.886
OLONG_012202 Oryza longistaminata OLONG_012202 N 0.873
OB11G19800 Oryza brachyantha OB11G19800 N 0.873
LPERR11G10050 Leersia perrieri LPERR11G10050 N 0.873
BGIOSGA015860 Oryza indica BGIOSGA015860 N 0.873
OGLUM11G12180 Oryza glumaepatula OGLUM11G12180 N 0.873
Pavir.Hb00670 Panicum virgatum Pavir.Hb00670 N 0.873
OS11G0448400 Oryza sativa OS11G0448400 N 0.873
ORUFI11G13080 Oryza rufipogon ORUFI11G13080 N 0.873
ORGLA11G0105900 Oryza glaberrima ORGLA11G0105900 N 0.873
Pavir.J05262 Panicum virgatum Pavir.J05262 N 0.859
OPUNC11G10590 Oryza punctata OPUNC11G10590 N 0.859
GRMZM2G143392 Zea mays GRMZM2G143392 N 0.859
Sb0010s016080 Sorghum bicolor Sb0010s016080 N 0.859
Si026193m.g Setaria italica Si026193m.g N 0.859