ONIVA03G13860 (Oryza nivara)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 ONIVA03G13860 T323910_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA03G13860.1 Sigma 70 303 372

Links

Other Sigma 70 family TFs
Other Oryza nivara TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30131.m007263 Ricinus communis 30131.m007263 I 0.000
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N 0.000
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.000
Bo2g009130 Brassica oleracea Bo2g009130 I 0.000
Bo3g004970 Brassica oleracea Bo3g004970 I 0.000
Bo9g174380 Brassica oleracea Bo9g174380 I 0.000
Bostr.13129s0103 Boechera stricta Bostr.13129s0103 I 0.000
Bra028654 Brassica rapa Bra028654 I 0.000
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I 0.000
Carubv10001525m.g Capsella rubella Carubv10001525m.g I 0.000
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.000
Ca_05454 Cicer arietinum Ca_05454 I 0.000
Ca_19000 Cicer arietinum Ca_19000 I 0.000
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.000
Cla009230 Citrullus lanatus Cla009230 I 0.000
Cla020348 Citrullus lanatus Cla020348 I 0.000
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.000
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.000
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.000
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N 0.000
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.000
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.000
fgenesh2_kg.6__825__AT5G08520.1 Arabidopsis lyrata fgenesh2_kg.6__825__AT5G08520.1 I 0.000
gene00786-v1.0-hybrid Fragaria vesca gene00786-v1.0-hybrid N 0.000
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.000
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.000
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.000
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.000
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.000
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.000
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.000
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.000
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I 0.000
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.000
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.000
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.000
GRMZM2G149958 Zea mays GRMZM2G149958 I 0.000
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N 0.000
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.000
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.000
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.000
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.000
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.000
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.000
MDP0000289018 Malus domestica MDP0000289018 I 0.000
mgf009460m Mimulus guttatus mgf009460m I 0.000
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.000
OB04G36550 Oryza brachyantha OB04G36550 N 0.000
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.000
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.000
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.000
PK13672.1 Cannabis sativa PK13672.1 I 0.000
Pm006046 Prunus mume Pm006046 I 0.000
Pm017050 Prunus mume Pm017050 I 0.000
Pm030197 Prunus mume Pm030197 I 0.000
PRUPE_ppa009092mg Prunus persica PRUPE_ppa009092mg I 0.000
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.000
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.000
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.000
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I 0.000
Sb06g032880 Sorghum bicolor Sb06g032880 N 0.000
Si022762m.g Setaria italica Si022762m.g N 0.000
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.000
SRM1 Arabidopsis thaliana AT5G08520 D 0.000
TCM_007672 Theobroma cacao TCM_007672 I 0.000
TCM_012262 Theobroma cacao TCM_012262 I 0.000
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I 0.000
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.000