OPUNC05G25360 (Oryza punctata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OPUNC05G25360 T323917_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC05G25360.1 Sigma 70 324 390

Links

Other Sigma 70 family TFs
Other Oryza punctata TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_05183 Aegilops tauschii F775_05183 N 0.896
BRADI2G14550 Brachypodium distachyon BRADI2G14550 N 0.882
BRADI2G14567 Brachypodium distachyon BRADI2G14567 N 0.910
MLOC_12452 Hordeum vulgare MLOC_12452 N 0.896
LPERR05G23430 Leersia perrieri LPERR05G23430 N 0.924
OBART05G27740 Oryza barthii OBART05G27740 N 0.955
OB05G35290 Oryza brachyantha OB05G35290 N 0.955
ORGLA05G0241100 Oryza glaberrima ORGLA05G0241100 N 0.955
OGLUM05G29230 Oryza glumaepatula OGLUM05G29230 N 0.955
BGIOSGA020470 Oryza indica BGIOSGA020470 N 0.955
OLONG_010405 Oryza longistaminata OLONG_010405 N 0.955
OMERI05G23660 Oryza meridionalis OMERI05G23660 N 0.955
ONIVA05G29730 Oryza nivara ONIVA05G29730 N 0.955
ORUFI05G29710 Oryza rufipogon ORUFI05G29710 N 0.955
OS05G0589200 Oryza sativa OS05G0589200 N 0.955
Pavir.J05536 Panicum virgatum Pavir.J05536 N 0.855
Pavir.J02804 Panicum virgatum Pavir.J02804 N 0.855
Si021619m.g Setaria italica Si021619m.g N 0.855
Sb09g030350 Sorghum bicolor Sb09g030350 N 0.806
Sb09g030380 Sorghum bicolor Sb09g030380 N 0.781
Traes_1DL_F23E9DAA9 Triticum aestivum Traes_1DL_F23E9DAA9 N 0.896
Traes_1BL_3E662FC82 Triticum aestivum Traes_1BL_3E662FC82 N 0.881
Traes_1AL_2F1278623 Triticum aestivum Traes_1AL_2F1278623 N 0.896
TRIUR3_15558 Triticum urartu TRIUR3_15558 N 0.896
GRMZM5G830932 Zea mays GRMZM5G830932 N 0.836