OS11G0448400 (Oryza sativa)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OS11G0448400 T323936_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OS11T0448400-02 Sigma 70 186 256

Links

Other Sigma 70 family TFs
Other Oryza sativa TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM11G12180 Oryza glumaepatula OGLUM11G12180 N 1.000
OB11G19800 Oryza brachyantha OB11G19800 N 1.000
OLONG_012202 Oryza longistaminata OLONG_012202 N 1.000
LPERR11G10050 Leersia perrieri LPERR11G10050 N 1.000
ORGLA11G0105900 Oryza glaberrima ORGLA11G0105900 N 1.000
BGIOSGA015860 Oryza indica BGIOSGA015860 N 1.000
ORUFI11G13080 Oryza rufipogon ORUFI11G13080 N 1.000
Si026193m.g Setaria italica Si026193m.g N 0.986
OPUNC11G10590 Oryza punctata OPUNC11G10590 N 0.986
Pavir.J05262 Panicum virgatum Pavir.J05262 N 0.986
Sb0010s016080 Sorghum bicolor Sb0010s016080 N 0.986
Pavir.Hb00670 Panicum virgatum Pavir.Hb00670 N 0.972
Traes_4AL_26117D669 Triticum aestivum Traes_4AL_26117D669 N 0.971
Traes_4BL_9CB9E3F96 Triticum aestivum Traes_4BL_9CB9E3F96 N 0.971
TRIUR3_30646 Triticum urartu TRIUR3_30646 N 0.971
F775_14570 Aegilops tauschii F775_14570 N 0.971
Traes_4DL_65B3128BF Triticum aestivum Traes_4DL_65B3128BF N 0.971
BRADI4G19540 Brachypodium distachyon BRADI4G19540 N 0.971
Traes_4AS_26117D669 Triticum aestivum Traes_4AS_26117D669 N 0.971
GRMZM2G143392 Zea mays GRMZM2G143392 N 0.958
Pavir.Ia03759 Panicum virgatum Pavir.Ia03759 N 0.914
Pavir.J38369 Panicum virgatum Pavir.J38369 N 0.887
BRADI1G66830 Brachypodium distachyon BRADI1G66830 N 0.886
BGIOSGA012312 Oryza indica BGIOSGA012312 N 0.873
Sb01g039810 Sorghum bicolor Sb01g039810 N 0.873
ORGLA03G0116800 Oryza glaberrima ORGLA03G0116800 N 0.873
OLONG_007716 Oryza longistaminata OLONG_007716 N 0.873
OBART03G12110 Oryza barthii OBART03G12110 N 0.873
OS03G0271100 Oryza sativa OS03G0271100 N 0.873
ONIVA03G13860 Oryza nivara ONIVA03G13860 N 0.873
OB03G22220 Oryza brachyantha OB03G22220 N 0.873
OPUNC03G11670 Oryza punctata OPUNC03G11670 N 0.873
Si035112m.g Setaria italica Si035112m.g N 0.871
Traes_4DL_B8D22E4C2 Triticum aestivum Traes_4DL_B8D22E4C2 N 0.871
GRMZM2G164084 Zea mays GRMZM2G164084 N 0.871
MLOC_59299 Hordeum vulgare MLOC_59299 N 0.871
GRMZM2G100086 Zea mays GRMZM2G100086 N 0.871
Traes_4AS_DE644E0CF Triticum aestivum Traes_4AS_DE644E0CF N 0.871
F775_32094 Aegilops tauschii F775_32094 N 0.871
GRMZM2G003182 Zea mays GRMZM2G003182 N 0.871
orange1.1g007404m.g Citrus sinensis orange1.1g007404m.g N 0.718
Ciclev10030998m.g Citrus clementina Ciclev10030998m.g N 0.718
GSMUA_Achr7G04860_001 Musa acuminata GSMUA_Achr7G04860_001 N 0.718
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.718
PK16345.1 Cannabis sativa PK16345.1 N 0.704
chr1.CM0017.250.nc Lotus japonicus chr1.CM0017.250.nc N 0.704
PGSC0003DMG400031111 Solanum tuberosum PGSC0003DMG400031111 N 0.704
Solyc01g081490.2 Solanum lycopersicum Solyc01g081490.2 N 0.704
POPTR_0013s06770 Populus trichocarpa POPTR_0013s06770 N 0.704
TCM_025741 Theobroma cacao TCM_025741 N 0.704
Cla007091 Citrullus lanatus Cla007091 N 0.704
evm.TU.supercontig_73.29 Carica papaya evm.TU.supercontig_73.29 N 0.704
30148.m001412 Ricinus communis 30148.m001412 N 0.704
gene17946-v1.0-hybrid Fragaria vesca gene17946-v1.0-hybrid N 0.704