Phatr3_J9312 (Phaeodactylum tricornutum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Phatr3_J9312 T323952_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J9312.p1 Sigma 70 428 498

Links

Other Sigma 70 family TFs
Other Phaeodactylum tricornutum TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_kg.C_60284 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_60284 N 0.915
Thaps33891 Thalassiosira pseudonana Thaps33891 N 0.887
ABW97889.1 Hemiselmis andersenii ABW97889.1 N 0.732
AFP65672.1 Chroomonas mesostigmatica AFP65672.1 N 0.732
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.718