Sb09g030110 (Sorghum bicolor)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Sb09g030110 T323973_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Sb09g030110.1 Sigma 70 267 338

Links

Other Sigma 70 family TFs
Other Sorghum bicolor TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30169.m006532 Ricinus communis 30169.m006532 N 0.710
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N 0.725
BGIOSGA020460 Oryza indica BGIOSGA020460 N 0.899
BRADI2G14790 Brachypodium distachyon BRADI2G14790 N 0.732
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N 0.739
Ca_03953 Cicer arietinum Ca_03953 N 0.739
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N 0.725
Cla004302 Citrullus lanatus Cla004302 N 0.754
Cucsa.012950 Cucumis sativus Cucsa.012950 N 0.754
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N 0.725
F775_08366 Aegilops tauschii F775_08366 N 0.899
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N 0.725
GLYMA04G41691 Glycine max GLYMA04G41691 N 0.739
GLYMA06G13100 Glycine max GLYMA06G13100 N 0.725
GLYMA13G08390 Glycine max GLYMA13G08390 N 0.739
GLYMA14G31370 Glycine max GLYMA14G31370 N 0.725
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N 0.725
GRMZM2G077436 Zea mays GRMZM2G077436 N 0.913
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N 0.754
LPERR05G23180 Leersia perrieri LPERR05G23180 N 0.913
Lus10014934.g Linum usitatissimum Lus10014934.g N 0.739
MDP0000831937 Malus domestica MDP0000831937 N 0.725
mgf001401m Mimulus guttatus mgf001401m N 0.754
mgf006107m Mimulus guttatus mgf006107m N 0.710
MLOC_61094 Hordeum vulgare MLOC_61094 N 0.899
OB05G35020 Oryza brachyantha OB05G35020 N 0.913
OBART05G27520 Oryza barthii OBART05G27520 N 0.899
OGLUM05G29030 Oryza glumaepatula OGLUM05G29030 N 0.899
OLONG_028119 Oryza longistaminata OLONG_028119 N 0.899
OMERI05G23510 Oryza meridionalis OMERI05G23510 N 0.899
ONIVA05G29570 Oryza nivara ONIVA05G29570 N 0.899
OPUNC05G25110 Oryza punctata OPUNC05G25110 N 0.899
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N 0.725
ORGLA05G0239100 Oryza glaberrima ORGLA05G0239100 N 0.899
ORUFI05G29480 Oryza rufipogon ORUFI05G29480 N 0.899
Pavir.J13718 Panicum virgatum Pavir.J13718 N 0.942
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N 0.700
PK06897.1 Cannabis sativa PK06897.1 N 0.710
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N 0.710
POPTR_0015s02320 Populus trichocarpa POPTR_0015s02320 N 0.800
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N 0.725
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N 0.710
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N 0.710
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N 0.710
Si021904m.g Setaria italica Si021904m.g N 0.928
Solyc03g007370.2 Solanum lycopersicum Solyc03g007370.2 N 0.710
TCM_015349 Theobroma cacao TCM_015349 N 0.739
Traes_1AL_0C41C44B1 Triticum aestivum Traes_1AL_0C41C44B1 N 0.899
TRIUR3_33378 Triticum urartu TRIUR3_33378 N 0.899
SIGE Vitis vinifera VIT_16s0050g02520 N 0.739