Si035112m.g (Setaria italica)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Si035112m.g T323991_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si035112m Sigma 70 295 364

Links

Other Sigma 70 family TFs
Other Setaria italica TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA012312 Oryza indica BGIOSGA012312 N 0.929
BGIOSGA015860 Oryza indica BGIOSGA015860 N 0.871
Bo5g009070 Brassica oleracea Bo5g009070 N 0.700
Bra018617 Brassica rapa Bra018617 N 0.700
BRADI1G66830 Brachypodium distachyon BRADI1G66830 N 0.929
BRADI4G19540 Brachypodium distachyon BRADI4G19540 N 0.871
F775_14570 Aegilops tauschii F775_14570 N 0.871
F775_32094 Aegilops tauschii F775_32094 N 0.914
Gorai.004G253700 Gossypium raimondii Gorai.004G253700 N 0.700
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.700
GRMZM2G003182 Zea mays GRMZM2G003182 N 0.943
GRMZM2G100086 Zea mays GRMZM2G100086 N 0.943
GRMZM2G143392 Zea mays GRMZM2G143392 N 0.886
GRMZM2G164084 Zea mays GRMZM2G164084 N 0.943
LPERR11G10050 Leersia perrieri LPERR11G10050 N 0.871
MLOC_59299 Hordeum vulgare MLOC_59299 N 0.914
OB03G22220 Oryza brachyantha OB03G22220 N 0.929
OB11G19800 Oryza brachyantha OB11G19800 N 0.871
OBART03G12110 Oryza barthii OBART03G12110 N 0.929
OGLUM11G12180 Oryza glumaepatula OGLUM11G12180 N 0.871
OLONG_007716 Oryza longistaminata OLONG_007716 N 0.929
OLONG_012202 Oryza longistaminata OLONG_012202 N 0.871
ONIVA03G13860 Oryza nivara ONIVA03G13860 N 0.929
OPUNC03G11670 Oryza punctata OPUNC03G11670 N 0.929
OPUNC11G10590 Oryza punctata OPUNC11G10590 N 0.857
ORGLA03G0116800 Oryza glaberrima ORGLA03G0116800 N 0.929
ORGLA11G0105900 Oryza glaberrima ORGLA11G0105900 N 0.871
ORUFI11G13080 Oryza rufipogon ORUFI11G13080 N 0.871
OS03G0271100 Oryza sativa OS03G0271100 N 0.929
OS11G0448400 Oryza sativa OS11G0448400 N 0.871
Pavir.Hb00670 Panicum virgatum Pavir.Hb00670 N 0.887
Pavir.Ia03759 Panicum virgatum Pavir.Ia03759 N 0.943
Pavir.J05262 Panicum virgatum Pavir.J05262 N 0.886
Pavir.J38369 Panicum virgatum Pavir.J38369 N 0.943
Sb0010s016080 Sorghum bicolor Sb0010s016080 N 0.886
Sb01g039810 Sorghum bicolor Sb01g039810 N 0.957
Si026193m.g Setaria italica Si026193m.g N 0.886
Traes_4AL_26117D669 Triticum aestivum Traes_4AL_26117D669 N 0.871
Traes_4AS_26117D669 Triticum aestivum Traes_4AS_26117D669 N 0.871
Traes_4AS_DE644E0CF Triticum aestivum Traes_4AS_DE644E0CF N 0.914
Traes_4BL_9CB9E3F96 Triticum aestivum Traes_4BL_9CB9E3F96 N 0.871
Traes_4DL_65B3128BF Triticum aestivum Traes_4DL_65B3128BF N 0.871
Traes_4DL_B8D22E4C2 Triticum aestivum Traes_4DL_B8D22E4C2 N 0.914
TRIUR3_30646 Triticum urartu TRIUR3_30646 N 0.871