Solyc03g007370.2 (Solanum lycopersicum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Solyc03g007370.2 T323995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g007370.2.1 Sigma 70 282 354

Links

Other Sigma 70 family TFs
Other Solanum lycopersicum TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N 0.971
Ca_03953 Cicer arietinum Ca_03953 N 0.928
PK06897.1 Cannabis sativa PK06897.1 N 0.913
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N 0.887
Bostr.10199s0021 Boechera stricta Bostr.10199s0021 N 0.886
Carubv10000608m.g Capsella rubella Carubv10000608m.g N 0.886
Cagra.8922s0001 Capsella grandiflora Cagra.8922s0001 N 0.886
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N 0.884
mgf001401m Mimulus guttatus mgf001401m N 0.884
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N 0.884
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N 0.884
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N 0.884
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N 0.884
Bra026466 Brassica rapa Bra026466 N 0.871
Bo9g013770 Brassica oleracea Bo9g013770 N 0.871
SIGE Arabidopsis thaliana AT5G24120 N 0.871
Thhalv10004166m.g Eutrema salsugineum Thhalv10004166m.g N 0.871
mgf006107m Mimulus guttatus mgf006107m N 0.871
SIGE Arabidopsis lyrata fgenesh2_kg.6__2403__AT5G24120.1 N 0.871
GLYMA04G41691 Glycine max GLYMA04G41691 N 0.871
SIGE Vitis vinifera VIT_16s0050g02520 N 0.870
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N 0.870
Cucsa.012950 Cucumis sativus Cucsa.012950 N 0.870
30169.m006532 Ricinus communis 30169.m006532 N 0.870
Cla004302 Citrullus lanatus Cla004302 N 0.870
TCM_015349 Theobroma cacao TCM_015349 N 0.870
POPTR_0015s02320 Populus trichocarpa POPTR_0015s02320 N 0.861
MDP0000831937 Malus domestica MDP0000831937 N 0.857
GLYMA06G13100 Glycine max GLYMA06G13100 N 0.857
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N 0.855
Lus10014934.g Linum usitatissimum Lus10014934.g N 0.855
MTR_3g090900 Medicago truncatula MTR_3g090900 N 0.855
Pm019782 Prunus mume Pm019782 N 0.843
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N 0.841
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N 0.841
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N 0.841
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N 0.829
Bo7g097160 Brassica oleracea Bo7g097160 N 0.814
Bra009735 Brassica rapa Bra009735 N 0.814
cassava29286.valid.m1 Manihot esculenta cassava29286.valid.m1 N 0.797
GLYMA13G08390 Glycine max GLYMA13G08390 N 0.797
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N 0.783
GLYMA14G31370 Glycine max GLYMA14G31370 N 0.783
Si021904m.g Setaria italica Si021904m.g N 0.725
OB05G35020 Oryza brachyantha OB05G35020 N 0.725
Pavir.J13718 Panicum virgatum Pavir.J13718 N 0.714
Traes_1AL_0C41C44B1 Triticum aestivum Traes_1AL_0C41C44B1 N 0.710
F775_08366 Aegilops tauschii F775_08366 N 0.710
Sb09g030110 Sorghum bicolor Sb09g030110 N 0.710
TRIUR3_33378 Triticum urartu TRIUR3_33378 N 0.710
MLOC_61094 Hordeum vulgare MLOC_61094 N 0.710