Solyc03g097320.2 (Solanum lycopersicum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Solyc03g097320.2 T323996_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g097320.2.1 Sigma 70 270 340

Links

Other Sigma 70 family TFs
Other Solanum lycopersicum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA016274 Oryza indica BGIOSGA016274 N 0.000
BRADI5G08167 Brachypodium distachyon BRADI5G08167 N 0.000
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.000
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N 0.000
Ca_08511 Cicer arietinum Ca_08511 N 0.000
Ca_09562 Cicer arietinum Ca_09562 I 0.000
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N 0.000
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.000
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N 0.000
F775_11712 Aegilops tauschii F775_11712 N 0.000
GLYMA05G28090 Glycine max GLYMA05G28090 N 0.000
GLYMA18G00840 Glycine max GLYMA18G00840 N 0.000
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N 0.000
GRMZM2G143205 Zea mays GRMZM2G143205 N 0.000
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N 0.000
LPERR04G07320 Leersia perrieri LPERR04G07320 N 0.000
MTR_8g080800 Medicago truncatula MTR_8g080800 N 0.000
OB04G17680 Oryza brachyantha OB04G17680 N 0.000
OBART04G10490 Oryza barthii OBART04G10490 N 0.000
OGLUM04G10170 Oryza glumaepatula OGLUM04G10170 N 0.000
OPUNC04G08570 Oryza punctata OPUNC04G08570 N 0.000
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N 0.000
ORGLA02G0342600 Oryza glaberrima ORGLA02G0342600 N 0.000
ORGLA04G0075400 Oryza glaberrima ORGLA04G0075400 N 0.000
ORUFI04G11670 Oryza rufipogon ORUFI04G11670 N 0.000
OS04G0388500 Oryza sativa OS04G0388500 N 0.000
Pavir.Ga01952 Panicum virgatum Pavir.Ga01952 N 0.000
Pavir.Gb01963 Panicum virgatum Pavir.Gb01963 N 0.000
PDK_20s1550381g002 Phoenix dactylifera PDK_20s1550381g002 N 0.000
PK06349.1 Cannabis sativa PK06349.1 N 0.000
Pm007031 Prunus mume Pm007031 N 0.000
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N 0.000
Sb06g013850 Sorghum bicolor Sb06g013850 N 0.000
Si009249m.g Setaria italica Si009249m.g N 0.000
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.000
TCM_008731 Theobroma cacao TCM_008731 N 0.000
Traes_2AL_773EA7A5A Triticum aestivum Traes_2AL_773EA7A5A N 0.000
Traes_2AS_AE392E835 Triticum aestivum Traes_2AS_AE392E835 N 0.000
Traes_2BL_A89BDB407 Triticum aestivum Traes_2BL_A89BDB407 N 0.000
Traes_2BS_AF4D5351B Triticum aestivum Traes_2BS_AF4D5351B N 0.000
Traes_2DL_474B433DF Triticum aestivum Traes_2DL_474B433DF N 0.000
Traes_7DS_7B303CBAF Triticum aestivum Traes_7DS_7B303CBAF N 0.000
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N 0.000