Thaps33891 (Thalassiosira pseudonana)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Thaps33891 T324009_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps33891 Sigma 70 66 136

Links

Other Sigma 70 family TFs
Other Thalassiosira pseudonana TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA022010 Oryza indica BGIOSGA022010 N 0.000
Bra003405 Brassica rapa Bra003405 I 0.000
BRADI1G49980 Brachypodium distachyon BRADI1G49980 N 0.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 0.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 0.000
GRMZM2G118690 Zea mays GRMZM2G118690 N 0.000
LPERR06G01660 Leersia perrieri LPERR06G01660 N 0.000
MLOC_15776 Hordeum vulgare MLOC_15776 N 0.000
OB06G11850 Oryza brachyantha OB06G11850 N 0.000
OBART06G01840 Oryza barthii OBART06G01840 N 0.000
OGLUM06G01860 Oryza glumaepatula OGLUM06G01860 N 0.000
OMERI06G01780 Oryza meridionalis OMERI06G01780 N 0.000
ONIVA06G02210 Oryza nivara ONIVA06G02210 N 0.000
OPUNC06G01720 Oryza punctata OPUNC06G01720 N 0.000
ORGLA06G0019100 Oryza glaberrima ORGLA06G0019100 N 0.000
ORUFI06G01870 Oryza rufipogon ORUFI06G01870 N 0.000
OS06G0130600 Oryza sativa OS06G0130600 N 0.000
Pavir.Db02349 Panicum virgatum Pavir.Db02349 N 0.000
Pavir.J00934 Panicum virgatum Pavir.J00934 N 0.000
Sb10g002020 Sorghum bicolor Sb10g002020 N 0.000
Si006972m.g Setaria italica Si006972m.g N 0.000
Traes_4AL_A02408BC8 Triticum aestivum Traes_4AL_A02408BC8 N 0.000
Traes_7DS_FE8BC1125 Triticum aestivum Traes_7DS_FE8BC1125 N 0.000
TRIUR3_11677 Triticum urartu TRIUR3_11677 N 0.000