CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps40966
(
Thalassiosira pseudonana
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
Thaps40966
T324012_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps40966
Sigma 70
89
163
LVASNLRMVQRVVNLYIRNGLGSEYNAGDLMQDGTMALIRAAEKYEPERGFRFSTYAMYWIRSAVKRSQTMQSRI
Links
Other
Sigma 70
family TFs
Other
Thalassiosira pseudonana
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pm.C_130120
Fragilariopsis cylindrus
estExt_fgenesh2_pm.C_130120
N
0.761
Phatr3_J9855
Phaeodactylum tricornutum
Phatr3_J9855
N
0.718