53467 (Aureococcus anophagefferens)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 53467 T324084_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
53467 Sigma 70 217 287

Links

Other Sigma 70 family TFs
Other Aureococcus anophagefferens TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABW97889.1 Hemiselmis andersenii ABW97889.1 N 0.761
AFP65672.1 Chroomonas mesostigmatica AFP65672.1 N 0.761
Thaps33682 Thalassiosira pseudonana Thaps33682 N 0.746
Phatr3_J17029 Phaeodactylum tricornutum Phatr3_J17029 N 0.746
estExt_Genewise1Plus.C_60358 Fragilariopsis cylindrus estExt_Genewise1Plus.C_60358 N 0.732
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.732
TTRE_0000710801 Trichuris trichiura TTRE_0000710801 N 0.718
estExt_fgenesh1_pg.C_280046 Physcomitrella patens estExt_fgenesh1_pg.C_280046 N 0.718
estExt_gwp_gw1.C_280061 Physcomitrella patens estExt_gwp_gw1.C_280061 N 0.704