estExt_fgenesh2_kg.C_60284 (Fragilariopsis cylindrus)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 estExt_fgenesh2_kg.C_60284 T324113_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_60284 Sigma 70 141 211

Links

Other Sigma 70 family TFs
Other Fragilariopsis cylindrus TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phatr3_J9312 Phaeodactylum tricornutum Phatr3_J9312 N 0.915
Thaps33891 Thalassiosira pseudonana Thaps33891 N 0.859
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.746
AFP65672.1 Chroomonas mesostigmatica AFP65672.1 N 0.718
ABW97889.1 Hemiselmis andersenii ABW97889.1 N 0.718
Solyc01g081490.2 Solanum lycopersicum Solyc01g081490.2 N 0.704