estExt_Genewise1Plus.C_60358 (Fragilariopsis cylindrus)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 estExt_Genewise1Plus.C_60358 T324119_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_60358 Sigma 70 161 231

Links

Other Sigma 70 family TFs
Other Fragilariopsis cylindrus TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Phatr3_J17029 Phaeodactylum tricornutum Phatr3_J17029 N 0.915
Thaps33682 Thalassiosira pseudonana Thaps33682 N 0.859
53467 Aureococcus anophagefferens 53467 N 0.732
TTRE_0000710801 Trichuris trichiura TTRE_0000710801 N 0.704