mgf001401m (Mimulus guttatus)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 mgf001401m T324133_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mgf001401m Sigma 70 280 351

Links

Other Sigma 70 family TFs
Other Mimulus guttatus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK06897.1 Cannabis sativa PK06897.1 N 0.899
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N 0.826
mgf006107m Mimulus guttatus mgf006107m N 0.870
Cucsa.012950 Cucumis sativus Cucsa.012950 N 0.870
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N 0.870
cassava29286.valid.m1 Manihot esculenta cassava29286.valid.m1 N 0.783
30169.m006532 Ricinus communis 30169.m006532 N 0.855
Pm019782 Prunus mume Pm019782 N 0.855
Cla004302 Citrullus lanatus Cla004302 N 0.870
Ca_03953 Cicer arietinum Ca_03953 N 0.899
SIGE Vitis vinifera VIT_16s0050g02520 N 0.870
TRIUR3_33378 Triticum urartu TRIUR3_33378 N 0.754
Traes_1AL_0C41C44B1 Triticum aestivum Traes_1AL_0C41C44B1 N 0.754
TCM_015349 Theobroma cacao TCM_015349 N 0.855
Bostr.10199s0021 Boechera stricta Bostr.10199s0021 N 0.884
Cagra.8922s0001 Capsella grandiflora Cagra.8922s0001 N 0.884
Thhalv10004166m.g Eutrema salsugineum Thhalv10004166m.g N 0.870
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N 0.855
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N 0.855
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N 0.841
Pavir.J13718 Panicum virgatum Pavir.J13718 N 0.754
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N 0.870
MDP0000831937 Malus domestica MDP0000831937 N 0.855
Lus10014934.g Linum usitatissimum Lus10014934.g N 0.913
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N 0.870
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N 0.870
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N 0.870
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N 0.870
Carubv10000608m.g Capsella rubella Carubv10000608m.g N 0.884
Solyc03g007370.2 Solanum lycopersicum Solyc03g007370.2 N 0.884
Si021904m.g Setaria italica Si021904m.g N 0.754
Sb09g030110 Sorghum bicolor Sb09g030110 N 0.754
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N 0.841
GRMZM2G077436 Zea mays GRMZM2G077436 N 0.739
GLYMA14G31370 Glycine max GLYMA14G31370 N 0.841
GLYMA13G08390 Glycine max GLYMA13G08390 N 0.855
GLYMA06G13100 Glycine max GLYMA06G13100 N 0.841
GLYMA04G41691 Glycine max GLYMA04G41691 N 0.855
SIGE Arabidopsis lyrata fgenesh2_kg.6__2403__AT5G24120.1 N 0.870
F775_08366 Aegilops tauschii F775_08366 N 0.754
Bra026466 Brassica rapa Bra026466 N 0.870
Bra009735 Brassica rapa Bra009735 N 0.841
Bo9g013770 Brassica oleracea Bo9g013770 N 0.870
Bo7g097160 Brassica oleracea Bo7g097160 N 0.841
BGIOSGA020460 Oryza indica BGIOSGA020460 N 0.754
LPERR05G23180 Leersia perrieri LPERR05G23180 N 0.739
MLOC_61094 Hordeum vulgare MLOC_61094 N 0.754
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N 0.899
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N 0.855
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N 0.913
ORUFI05G29480 Oryza rufipogon ORUFI05G29480 N 0.754
ORGLA05G0239100 Oryza glaberrima ORGLA05G0239100 N 0.754
OPUNC05G25110 Oryza punctata OPUNC05G25110 N 0.754
ONIVA05G29570 Oryza nivara ONIVA05G29570 N 0.754
OMERI05G23510 Oryza meridionalis OMERI05G23510 N 0.754
OLONG_028119 Oryza longistaminata OLONG_028119 N 0.754
OGLUM05G29030 Oryza glumaepatula OGLUM05G29030 N 0.754
OBART05G27520 Oryza barthii OBART05G27520 N 0.754
OB05G35020 Oryza brachyantha OB05G35020 N 0.754
MTR_3g090900 Medicago truncatula MTR_3g090900 N 0.812
SIGE Arabidopsis thaliana AT5G24120 N 0.870